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Report for CCDS69226.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
69226.1 Public Homo sapiens 6 SCAF8 24 110 108 CCDS HistoryNCBI Gene:22828Re-query CCDS DB by CCDS ID:69226.1Re-query CCDS DB by GeneID:22828See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 69226.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367186.7 ENSP00000356154.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367186.7Link to Ensembl Protein Viewer:ENSP00000356154.4Re-query CCDS DB by Nucleotide ID:ENST00000367186Re-query CCDS DB by Protein ID:ENSP00000356154
Original member Current member NCBI NM_001286189.1 NP_001273118.1 Accepted alive Link to Nucleotide Sequence:NM_001286189.1Link to Protein Sequence:NP_001273118.1Re-query CCDS DB by Nucleotide ID:NM_001286189Re-query CCDS DB by Protein ID:NP_001273118Link to BLAST:NP_001273118.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273118.1 1337 Q9UPN6-2 1337 100% 0 0

Chromosomal Locations for CCDS 69226.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 154733423 154733503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154733847 154733930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154741956 154742018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154773989 154774072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154778001 154778045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154787861 154788022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154792823 154792976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154795009 154795139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154801971 154802147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154803544 154803623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154805369 154805486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154808070 154808201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154808686 154808798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154810015 154810208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154815716 154815816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154818479 154818592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154820177 154820333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154822276 154822409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154824234 154824378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154827172 154827240 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154830922 154831140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 154831939 154833395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4014 nt):
ATGCCGCAGCCGCTGCTGCCAGCGCTTCCTCCTCTGTCTTCGCCGAGCGGGGCTGGTTCCTGCGGCCCGA
GCGGCGGGGAGTGCAGTGGCCGCCGCCTCTTCCGCCGCCGGGCTCGGGGCCTCCGCAGCGACAACATGGA
GGCCGTGAAGACCTTCAATAGCGAGGATTGTGCCTCTACTCCTGCTTGTACAGACTGCTTTTCCAGCAGC
ATGGACACAAGAAGCATATTGTATTCCCTGAATGACTATAAACCACCCATTTCGAAAGCGAAAATGACCC
AAATTACTAAGGCAGCCATCAAAGCTATTAAGTTCTATAAACATGTGGTACAGAGTGTTGAGAAGTTTAT
TCAGAAATGTAAACCAGAATACAAAGTACCTGGACTTTATGTTATTGACTCCATTGTGCGACAATCCCGA
CATCAGTTTGGTCAAGAAAAGGATGTGTTTGCACCCAGATTTAGTAATAACATCATTAGCACTTTCCAGA
ATTTATATCGTTGCCCTGGGGATGACAAGAGTAAAATAGTGAGAGTACTAAACTTATGGCAGAAGAATAA
TGTATTTAAGAGTGAGATTATTCAGCCCCTTTTGGATATGGCAGCCGGGATTCCGCCTCCAGTTGTCACA
CCTGTTTTGGCCAGCACTACCACTGCTATGAGCAATACTCCAGGAACTCCTGTGACACCTGTTACTCCGG
CCAATGTGGTCCAAGGCTTACCTGATCCGTGGGTATCTCAGATAACAAATACAGATACACTTGCGGCTGT
AGCTCAGATCTTGCAAAGTCCTCAAGGCCAGCAGCTTCAACAATTAATACAAACCTTACAGATACAACAA
CAGAAGCCCCAGCCTTCCATTCTGCAGGCCCTAGATGCTGGTCTTGTTGTTCAGTTGCAAGCTCTTACGG
CACAACTTACAGCTGCAGCTGCAGCTGCCAACACTCTTACTCCCTTAGAACAGGGAGTCTCCTTTAACAA
GAAGTTGATGGATAGGTTTGATTTTGGGGAAGACTCTGAGCATAGTGAAGAACCCAAAAAGGAAATTCCA
GCTTCACAACTTTCTCACGTTTCAGAATCTGTGAACAATTCCATTTTTCATCAGATAGCAGAACAACTAC
AACAGCAAAACCTAGAACATCTCAGACAGCAGCTCTTGGAGCAGCAACAGCCTCAAAAGGCCACTCCTCA
GGATAGTCAGGAAGGAACCTTTGGGTCAGAGCATTCAGCGTCACCATCACAAGGGAGTAGTCAGCAGCAT
TTTCTTGAACCTGAAGTCAATTTGGATGATTCCATAGATATTCAGCAACAGGATATGGATATAGATGAAG
GGCAAGATGGAGTGGAAGAGGAGGTCTTTGAACAAGAAGCTAAGAAAGTGGCGGTTCGCTCAAGATCAAG
AACACATTCACGATCTCGTTCAAGATCACCAAGAAAACGAAGGTCTAGGTCACGGTCTGGCTCTAGAAAG
CGTAAACACAGAAAGCGATCACGCTCCCGCTCAAGAGAAAGAAAGAGGAAATCATCACGGTCGTATTCAA
GTGAAAGGAGAGCCAGAGAAAGGGAGAAAGAACGACAGAAAAAGGGATTACCTCCAATTAGATCTAAAAC
ACTAAGTGTATGTAGTACTACTCTCTGGGTTGGGCAAGTGGACAAGAAGGCAACACAGCAAGACTTAACC
AACCTGTTTGAAGAGTTTGGACAGATTGAATCCATTAATATGATTCCTCCCCGGGGCTGTGCTTATGTCT
GCATGGTTCATCGACAAGATGCATTTCGAGCTCTTCAGAAACTCAGTTCTGGATCATATAAAATTGGGTC
CAAGGTCATTAAGATCGCTTGGGCTTTAAACAAAGGTGTAAAAACAGAATACAAACAATTCTGGGATGTG
GATCTTGGAGTTACATATATACCATGGGAAAAAGTTAAAGTGGATGACTTGGAAGGTTTTGCAGAAGGAG
GCATGATTGATCAGGAGACTGTAAATACTGAGTGGGAAACTGTGAAAAGCTCAGAACCTGTTAAAGAGAC
GGTCCAGACAACTCAGAGCCCAACTCCAGTTGAAAAGGAGACAGTGGTCACAACCCAGGCAGAGGTTTTC
CCTCCTCCTGTTGCTATGTTGCAGATTCCAGTGGCGCCAGCCGTGCCTACAGTTAGTTTAGTCCCACCAG
CATTTCCTGTGTCGATGCCGGTTCCTCCTCCTGGATTCAGTCCAATCCCTCCACCTCCTTTTTTAAGAGC
AAGTTTTAACCCTTCACAACCACCACCTGGTTTCATGCCGCCTCCAGTTCCCCCACCTGTTGTGCCACCC
CCTACGATTCCACCAGTAGTACCAACATCTTTAGTGCAGCCGTCATTATCCATGACACCGGAAACTGTGA
AAGATGTTGGATTTGGTAGCCTTGTTATACCAGGCGGTTCTGTTGCCAGCAATCTTGCTACTTCCGCTCT
GCCAGCTGGAAATGTTTTTAATGCTCCAACTAAACAGGCAGAGCCTGAAGAAAAAGTACCTCATCTTATA
GACCACCAGATTTCTTCTGGTGAAAACACCAGATCAGTGATTCCAAATGATATTTCAAGTAATGCTGCAA
TTTTAGGAGGACAGCCGCCAAATGTGACAAGCAATTCTGGAATTCTGGGAGTCCAAAGACCAAATGTATC
AAGTAATTCTGAAATTCTTGGGGTCCGGCCATCTAATGTTTCCAGTAGTTCTGGGATTATTGCAGCCCAA
CCACCAAATATTCTAAATAACTCTGGAATATTGGGAATACAGCCACCCAGTGTGTCAAATAGTTCTGGAC
TTTTGGGAGTGCTACCCCCAAATATACCTAACAATTCTGGACTTGTAGGAGTACAGCCACCAAATGTTCC
AAATACTCCTGGACTTCTGGGAACACAGCCACCAGCTGGACCTCAAAACTTACCCCCTTTAAGTATCCCT
AATCAAAGGATGCCCACAATGCCAATGTTAGACATTCGTCCGGGACTAATACCACAGGCACCTGGGCCAA
GATTCCCTTTAATACAGCCTGGAATTCCACCCCAACGGGGAATCCCACCCCCATCGGTACTTGATTCAGC
TCTTCATCCACCACCCCGTGGACCTTTTCCTCCAGGAGATATTTTTAGTCAACCAGAAAGACCTTTTTTA
GCTCCTGGAAGACAAAGCGTAGACAATGTTACTAACCCAGAAAAAAGGATACCACTTGGGAATGATAACA
TTCAACAGGAAGGAGATAGAGATTACCGGTTTCCTCCTATAGAAACCAGGGAAAGCATTAGTAGACCTCC
CCCTGTGGATGTTAGAGATGTGGTTGGGCGGCCTATAGATCCAAGAGAAGGTCCTGGACGGCCTCCACTA
GATGGTAGGGATCATTTTGGAAGACCTCCTGTAGATATAAGAGAGAATCTTGTGAGGCCAGGTATAGATC
ATCTTGGTCGAAGAGACCACTTTGGCTTTAATCCAGAGAAGCCCTGGGGGCATAGAGGAGATTTTGATGA
GAGAGAGCATCGGGTTCTACCGGTCTATGGTGGTCCAAAAGGCTTACATGAAGAAAGAGGTAGATTTCGG
TCTGGAAACTATCGATTTGATCCTAGAAGTGGTCCTTGGAACCGAGGATTTGGACAAGAAGTTCACAGAG
ATTTTGATGACCGCAGAAGACCCTGGGAGAGGCAAAGGGATAGGGATGACAGAGATTTTGATTTCTGCAG
AGAAATGAATGGAAATCGTCTTGGACGAGACAGAATTCAAAACACTTGGGTTCCCCCTCCTCATGCTCGG
GTTTTTGATTATTTTGAAGGGGCCACTTCTCAACGAAAAGGTGATAATGTGCCTCAGGTTAATGGTGAAA
ATACAGAGAGACATGCTCAGCCACCACCTATACCAGTACAGAATGATCCTGAACTTTATGAAAAACTGAC
ATCTTCAAATGAAATAAACAAGGAGAAGAGTGACACAGTTGCTGATATAGAAAGTGAACCAGTGGTAGAA
AGCACAGAAACTGAGGGGACATAA

Translation (1337 aa):
MPQPLLPALPPLSSPSGAGSCGPSGGECSGRRLFRRRARGLRSDNMEAVKTFNSEDCASTPACTDCFSSS
MDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSR
HQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVT
PVLASTTTAMSNTPGTPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQ
QKPQPSILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIP
ASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQH
FLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRK
RKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLT
NLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDV
DLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVF
PPPVAMLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPP
PTIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNAPTKQAEPEEKVPHLI
DHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPNVSSNSEILGVRPSNVSSSSGIIAAQ
PPNILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTPGLLGTQPPAGPQNLPPLSIP
NQRMPTMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFL
APGRQSVDNVTNPEKRIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPL
DGRDHFGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEERGRFR
SGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHAR
VFDYFEGATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEKLTSSNEINKEKSDTVADIESEPVVE
STETEGT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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