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Report for CCDS36657.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36657.1 Public Mus musculus 13 Bicd2 23 108 98 CCDS HistoryNCBI Gene:76895Re-query CCDS DB by CCDS ID:36657.1Re-query CCDS DB by GeneID:76895See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36657.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000048544.13 ENSMUSP00000039394.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000048544.13Link to Ensembl Protein Viewer:ENSMUSP00000039394.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000048544Re-query CCDS DB by Protein ID:ENSMUSP00000039394
Original member Current member NCBI NM_001039179.2 NP_001034268.1 Accepted alive Link to Nucleotide Sequence:NM_001039179.2Link to Protein Sequence:NP_001034268.1Re-query CCDS DB by Nucleotide ID:NM_001039179Re-query CCDS DB by Protein ID:NP_001034268Link to BLAST:NP_001034268.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001034268.1 851 Q921C5-2 851 100% 0 0

Chromosomal Locations for CCDS 36657.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 49341671 49341910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49369429 49369641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49375217 49375369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49377890 49378351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49379008 49380033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49380571 49380722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 49383043 49383352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2556 nt):
ATGTCCGCGCCGTCGGAGGAGGAGGAGTATGCGCGTCTGGTGATGGAGGCGCAGCCGGAGTGGCTGCGCG
CCGAGGTGAAGCGGCTGTCCCACGAGCTGGCCGAGACCACGCGTGAGAAGATCCAGGCGGCCGAGTATGG
ACTGGCGGTGCTGGAGGAGAAGCACCAGCTCAAGCTGCAGTTCGAGGAGCTCGAGGTGGACTATGAGGCC
ATCCGCAGCGAGATGGAGCAGCTCAAAGAGGCATTTGGCCAGGCACATACAAACCACAAGAAGGTGGCTG
CTGATGGTGAGAGCCGGGAGGAGAGCCTGATCCAGGAGTCGGCCTCCAAGGAGCAGTACTACGTGCGGAA
GGTGCTGGAGCTGCAGACAGAGCTGAAACAGCTGCGCAACGTCCTCACCAACACCCAGTCTGAGAATGAG
CGCCTCACGTCTGTGGCCCAGGAGCTAAAAGAGATCAACCAGAATGTGGAGATCCAGCGTGGTCGCCTGC
GGGATGACATCAAGGAGTACAAGTTCCGGGAGGCCCGTCTACTTCAGGACTACTCAGAGCTGGAGGAGGA
GAACATCAGCCTGCAGAAACAAGTGTCTGTGCTCAGGCAGAACCAGGTGGAGTTTGAGGGCCTCAAGCAT
GAAATCAAGCGCCTGGAGGAGGAGACAGAGTACCTCAACAGCCAGCTAGAGGATGCCATCCGGCTTAAGG
AGATCTCTGAACGGCAGTTGGAGGAGGCGCTGGAGACACTGAAGACAGAGCGGGAGCAGAAGAACAACCT
GCGCAAGGAGTTGTCGCACTACATGAGCATCAACGATTCCTTCTATACCAGCCACCTGCAGGTCTCCTTA
GATGGCCTCAAGTTCAGTGATGATACTGTCACCGCAGAGCCCAACAATGACGCCGAAGCCCTGGTCAATG
GCTTTGAGCACAGTGGCTTGGTCAAATCATCCTTGGACAACAAGACATCCACACCCAGGAAGGATGGCCT
AGCTCCACCCTCCCCCAGCCTCGTCTCTGACCTGCTCAGTGAGCTCCACATATCTGAGATCCAGAAGCTG
AAACAGCAGCTGGTGCAGATGGAGCGGGAGAAGGTGGGCCTGCTGGCAACACTGCAGGACACACAGAAGC
AGCTGGAGCAGGCTCGGGGAACCCTCTCTGAGCAGCATGAGAAGGTGAATCGTCTCACAGAGAACCTTAG
TGCCCTCCGGCGCCTGCAGGCTGGCAAGGAGCGACAGACCTCGTTGGATAATGAGAAGGACCGTGACAGC
CACGAAGACGGTGACTACTATGAGGTGGACATCAATGGGCCTGAGATCCTGGCCTGCAAGTACCACGTGG
CTGTGGCTGAGGCTGGCGAGCTCCGGGAGCAGCTCAAGGCGTTGCGCAGCACACACGAAGCTCGCGAAGC
CCAGCACGCAGAAGAAAAGGGCCGGTATGAGGCTGAGGGCCAGGCACTCACTGAGAAGATCTCTCTGCTG
GAGAAGGCTAGCCACCAGGACCGAGAGCTGCTGGCCCATCTGGAAAAGGAGCTGAAGAAGGTGAGCGATG
TGGCTGGTGAGACCCAGGGCAGCCTGAATGTGGCTCAGGATGAGCTGGTGACCTTCAGCGAGGAGCTGGC
CAACCTCTACCACCATGTGTGCATGTGCAACAACGAGACGCCCAACCGTGTCATGCTCGACTATTATCGT
GAGGGCCAGGGCAAGGCTGGCCGCACCAGCCCAGAGGGCCGCGGGCGCCGGTCACCTGTCCTCTTGCCCA
AGGGGCTGTTGGCCACAGAGGTGGGCCGAGCAGATGGTGGGACTGGGGACAACAGTCCTTCACCCAGTTC
TTCACTGCCGTCACCTCTGAGTGACCCCCGCCGGGAACCTATGAACATCTACAACCTGATCGCCATCATC
CGAGACCAGATCAAGCACCTGCAGGCAGCCGTGGACCGTACGACCGAGCTGTCCCGGCAGCGGATTGCCT
CGCAGGAGCTGGGCCCTGCTGTGGACAAGGACAAGGAAGCACTCATGGAGGAGATCCTCAAGCTGAAGTC
CCTGCTGAGTACCAAGCGGGAGCAGATCACCACACTGCGCACCGTGCTCAAGGCCAACAAGCAGACAGCT
GAGGTGGCCCTGGCCAACCTGAAGAGCAAGTATGAGAACGAGAAGGCCATGGTGACCGAGACCATGATGA
AGCTACGGAACGAGCTCAAGGCCCTCAAGGAAGACGCAGCCACCTTCTCCTCCCTGCGTGCCATGTTTGC
CACCAGGTGTGACGAATACATCACACAGCTGGATGAGATGCAGCGGCAGCTGGCAGCTGCCGAGGACGAG
AAGAAGACCCTTAACTCTCTGTTGCGCATGGCCATCCAGCAGAAGCTGGCGCTCACCCAGCGGCTGGAGC
TGCTGGAGCTGGACCATGAACAGACCCGCAGGGGCCGCAGCAAGGCCGCCTCCAAGGCCAAGCCAGCCTC
ACCGAGCGTAAGTCACACCTGCGCCTGCGCCAGCGAGAGGGCGGAGGGCGCCGGGCTGGCCAACCAGGTG
TTCTGCAGCGAGAAGCACAGCATTTACTGTGATTAG

Translation (851 aa):
MSAPSEEEEYARLVMEAQPEWLRAEVKRLSHELAETTREKIQAAEYGLAVLEEKHQLKLQFEELEVDYEA
IRSEMEQLKEAFGQAHTNHKKVAADGESREESLIQESASKEQYYVRKVLELQTELKQLRNVLTNTQSENE
RLTSVAQELKEINQNVEIQRGRLRDDIKEYKFREARLLQDYSELEEENISLQKQVSVLRQNQVEFEGLKH
EIKRLEEETEYLNSQLEDAIRLKEISERQLEEALETLKTEREQKNNLRKELSHYMSINDSFYTSHLQVSL
DGLKFSDDTVTAEPNNDAEALVNGFEHSGLVKSSLDNKTSTPRKDGLAPPSPSLVSDLLSELHISEIQKL
KQQLVQMEREKVGLLATLQDTQKQLEQARGTLSEQHEKVNRLTENLSALRRLQAGKERQTSLDNEKDRDS
HEDGDYYEVDINGPEILACKYHVAVAEAGELREQLKALRSTHEAREAQHAEEKGRYEAEGQALTEKISLL
EKASHQDRELLAHLEKELKKVSDVAGETQGSLNVAQDELVTFSEELANLYHHVCMCNNETPNRVMLDYYR
EGQGKAGRTSPEGRGRRSPVLLPKGLLATEVGRADGGTGDNSPSPSSSLPSPLSDPRREPMNIYNLIAII
RDQIKHLQAAVDRTTELSRQRIASQELGPAVDKDKEALMEEILKLKSLLSTKREQITTLRTVLKANKQTA
EVALANLKSKYENEKAMVTETMMKLRNELKALKEDAATFSSLRAMFATRCDEYITQLDEMQRQLAAAEDE
KKTLNSLLRMAIQQKLALTQRLELLELDHEQTRRGRSKAASKAKPASPSVSHTCACASERAEGAGLANQV
FCSEKHSIYCD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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