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Report for CCDS59048.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59048.1 Public Homo sapiens 7 ZNF853 24 110 108 CCDS HistoryNCBI Gene:54753Re-query CCDS DB by CCDS ID:59048.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59048.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000457543.4 ENSP00000455585.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000457543.4Link to Ensembl Protein Viewer:ENSP00000455585.1Re-query CCDS DB by Nucleotide ID:ENST00000457543Re-query CCDS DB by Protein ID:ENSP00000455585
Original member Current member NCBI NM_017560.3 NP_060030.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017560.3Link to Protein Sequence:NP_060030.1Re-query CCDS DB by Nucleotide ID:NM_017560Re-query CCDS DB by Protein ID:NP_060030Link to BLAST:NP_060030.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060030.1 659 P0CG23 659 100% 0 0

Chromosomal Locations for CCDS 59048.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6616175 6616186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6617190 6617307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6621122 6622971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1980 nt):
ATGCTCCACCAGCCGACTCCCGGGAATCGGGGTCTGACCGCCAGGATGGAAGTGGGGCCAGCCACCGAGA
CCTTCGTGCTGGAACTTCAATGTCTTGAGGATGGGGGCCCAGGGCCTGACACCCTCTCAGGTGGCAGCGG
TGGGAGCGAGAGTCAGGAGGAGGAAGAGCCTCAGGAGAGGAACAGCAGTCCACAGCGGCCAGCAGTCTCG
GCCCCAGTGGGGGCCAGTGAAATCGCTGAGGAAACCCGGCCGGGACAACGAGAGTTGCAACTGCAGCAGT
TAGAACAGCAGCCCGAGCCGCAGCAACAGCCGCAACACGAGCAGCTGCAACAGCCGCAGCCACACCTAGA
ACTGCAACAGCAGCCGCAGCAAGATGGGCAACAACAGCTATCTCAACTACAACAGGAAAAACACCAATCC
GTGCACCATCAGGAACTGAAACCAGAACTGCAGCTAATGCACCAGCAGCAACAGTTACAGCCACAGCAAG
TGCAAGAGCAACAGCGGTTGCAGCAGCAGCAGGAGCAGTTACAGACGCAGCAAGCACAAGAGCAACAGGT
ATTGCAGCAGCAGGAACAGCTACAGCAGCAAGTGCAAGAGCAACAGCTGTTACAGCAACAGCAGGAACAG
TTACAGCAGCAGCAGCTGCTACAACAGCAGGAACAGTTACAGCAGCAACAGTTTCAACAGCAGCAGGAAC
AGTTACAGCAGCAGCAGCAGCTACTATTGCTGCAGCAGCAGGGACAGTTACAGCAGCAACTGTTGCAGCA
GCAGCAGGCACAGTTACAACAGCAGCTGCTGGAACAGCAGCAGGCACAGTTACAGCAGCAGCTACTGCTG
CAGCAGCAGGAACAGTTACAGCAGCAGCAGCAACAGCAGCTGTTGCAACAGCAGCAGGAACAATTGCAGC
AGCAACAACTGCAGCCTCCTCCCCTGGAGCCCGAGGAGGAGGAAGAGGTGGAGCTGGAGCTCATGCCGGT
GGACCTGGGGTCAGAGCAGGAGCTGGAGCAGCAGCGGCAGGAGTTGGAGCGGCAGCAGGAGCTGGAACGG
CAGCAGGAGCAGCGGCAGCTGCAGCTCAAACTGCAGGAGGAGCTGCAGCAGCTGGAGCAACAGCTGGAGC
AGCAGCAGCAGCAGCTGGAGCAGCAGGAGGTGCAGCTGGAGCTGACCCCGGTGGAGCTAGGCGCCCAGCA
GCAGGAGGTGCAGCTGGAGCTGACCCCCGTGCAGCCGGAGCTGCAGCTGGAACTGGTGCCAGCCGCAGGG
GGCGGCGGAGCGGCGGTCCCGGGGGCTCCGGCCGCGGTCGTGGTGGCTCCCCCGGGCTACGTGGTGGTGC
AGGAGCTCATGGTGCTGCCCGCCGTGGCAGCGCCGGCCGTGGTGGCCATCCCGGGCCCGGCAGGCAGCGC
GGCGTTGACCCCTGCACGGCAGCGGCGGCGGCGGCGCGCTCGGGACCGGCCGACCATCTGCGGGGAGTGC
GGCAAGGGCTTCAGCCGCAGCACGGACCTGGTGCGCCACCAGGCCACGCACACGGGTGAGCGGCCACACC
GCTGCGGCGAGTGCGGCAAGGGCTTCTCGCAGCACTCGAATCTGGTGACGCACCAACGCATCCACACGGG
CGAGAAACCCTACGCCTGCTCCTACTGCGCCAAGCGCTTCAGCGAGAGCTCGGCGCTCGTGCAGCACCAG
CGCACGCACACCGGGGAGCGACCCTACGCCTGCGGGGACTGTGGCAAGCGCTTCAGCGTCTCCTCCAACC
TGCTGCGCCACCGGCGCACGCACTCGGGCGAGCGGCCCTACGTGTGCGAGGACTGTGGCGAGCGCTTCCG
ACACAAGGTGCAGATCCGCCGCCACGAGCGCCAGCTGCACGGCGCGGGCCGCTCCAGGGGCCTCGGCCTG
CTGCGCGCCTCGCGGCCGGCGGCCCTCGGTGGCCCAGCCCGCGCGGAGCAGGCCGCTACAGCCACTGCGC
CCGCAGACAAGGCGCTGTGA

Translation (659 aa):
MLHQPTPGNRGLTARMEVGPATETFVLELQCLEDGGPGPDTLSGGSGGSESQEEEEPQERNSSPQRPAVS
APVGASEIAEETRPGQRELQLQQLEQQPEPQQQPQHEQLQQPQPHLELQQQPQQDGQQQLSQLQQEKHQS
VHHQELKPELQLMHQQQQLQPQQVQEQQRLQQQQEQLQTQQAQEQQVLQQQEQLQQQVQEQQLLQQQQEQ
LQQQQLLQQQEQLQQQQFQQQQEQLQQQQQLLLLQQQGQLQQQLLQQQQAQLQQQLLEQQQAQLQQQLLL
QQQEQLQQQQQQQLLQQQQEQLQQQQLQPPPLEPEEEEEVELELMPVDLGSEQELEQQRQELERQQELER
QQEQRQLQLKLQEELQQLEQQLEQQQQQLEQQEVQLELTPVELGAQQQEVQLELTPVQPELQLELVPAAG
GGGAAVPGAPAAVVVAPPGYVVVQELMVLPAVAAPAVVAIPGPAGSAALTPARQRRRRRARDRPTICGEC
GKGFSRSTDLVRHQATHTGERPHRCGECGKGFSQHSNLVTHQRIHTGEKPYACSYCAKRFSESSALVQHQ
RTHTGERPYACGDCGKRFSVSSNLLRHRRTHSGERPYVCEDCGERFRHKVQIRRHERQLHGAGRSRGLGL
LRASRPAALGGPARAEQAATATAPADKAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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