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Report for CCDS32491.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32491.1 Public Homo sapiens 16 TERF2IP 24 110 108 CCDS HistoryNCBI Gene:54386Re-query CCDS DB by CCDS ID:32491.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32491.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300086.5 ENSP00000300086.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300086.5Link to Ensembl Protein Viewer:ENSP00000300086.4Re-query CCDS DB by Nucleotide ID:ENST00000300086Re-query CCDS DB by Protein ID:ENSP00000300086
Original member Current member NCBI NM_018975.4 NP_061848.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018975.4Link to Protein Sequence:NP_061848.2Re-query CCDS DB by Nucleotide ID:NM_018975Re-query CCDS DB by Protein ID:NP_061848Link to BLAST:NP_061848.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061848.2 399 Q9NYB0 399 100% 0 0

Chromosomal Locations for CCDS 32491.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 75647883 75648552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75654273 75654397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 75656207 75656611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1200 nt):
ATGGCGGAGGCGATGGATTTGGGCAAAGACCCCAACGGGCCCACCCATTCCTCGACTCTGTTCGTGAGGG
AC
GACGGCAGCTCCATGTCCTTCTACGTGCGGCCCAGCCCGGCCAAGCGTCGGCTGTCGACGCTCATCCT
G
CACGGCGGCGGCACCGTGTGCCGAGTGCAGGAGCCCGGGGCCGTGCTGCTGGCCCAGCCCGGGGAGGCG
CTG
GCCGAGGCCTCGGGTGATTTCATCTCCACGCAGTACATCCTGGACTGCGTGGAGCGCAACGAGAGGC
TG
GAGCTGGAGGCCTATCGGCTGGGCCCCGCCTCGGCGGCGGACACCGGCTCGGAAGCAAAGCCCGGGGC
C
CTGGCCGAGGGCGCCGCGGAGCCGGAGCCGCAGCGGCACGCCGGGCGGATCGCCTTCACGGATGCGGAC
GAC
GTAGCCATCCTTACCTACGTGAAGGAAAATGCCCGCTCGCCCAGCTCCGTCACCGGTAACGCCTTGT
GG
AAAGCGATGGAGAAGAGCTCGCTCACGCAGCACTCGTGGCAGTCCCTGAAGGACCGCTACCTCAAGCA
C
CTGCGGGGCCAGGAGCATAAGTACCTGCTGGGGGACGCGCCGGTGAGCCCCTCCTCCCAGAAGCTCAAG
CGG
AAGGCGGAGGAGGACCCGGAGGCCGCGGATAGCGGGGAACCACAGAATAAGAGAACTCCAGATTTGC
CT
GAAGAAGAGTATGTGAAGGAAGAAATCCAGGAGAATGAAGAAGCAGTCAAAAAGATGCTTGTGGAAGC
C
ACCCGGGAGTTTGAGGAGGTTGTGGTGGATGAGAGCCCTCCTGATTTTGAAATACATATAACTATGTGT
GAT
GATGATCCACCCACACCTGAGGAAGACTCAGAAACACAGCCTGATGAGGAGGAAGAAGAAGAAGAAG
AA
AAAGTTTCTCAACCAGAGGTGGGAGCTGCCATTAAGATCATTCGGCAGTTAATGGAGAAGTTTAACTT
G
GATCTATCAACAGTTACACAGGCCTTCCTAAAAAATAGTGGTGAGCTGGAGGCTACTTCCGCCTTCTTA
GCG
TCTGGTCAGAGAGCTGATGGATATCCCATTTGGTCCCGACAAGATGACATAGATTTGCAAAAAGATG
AT
GAGGATACCAGAGAGGCATTGGTCAAAAAATTTGGTGCTCAGAATGTAGCTCGGAGGATTGAATTTCG
A
AAGAAATAA


Translation (399 aa):
MAEAMDLGKDPNGPTHSSTLFVRDDGSSMSFYVRPSPAKRRLSTLILHGGGTVCRVQEPGAVLLAQPGEA
L
AEASGDFISTQYILDCVERNERLELEAYRLGPASAADTGSEAKPGALAEGAAEPEPQRHAGRIAFTDAD
D
VAILTYVKENARSPSSVTGNALWKAMEKSSLTQHSWQSLKDRYLKHLRGQEHKYLLGDAPVSPSSQKLK
R
KAEEDPEAADSG
EPQNKRTPDLPEEEYVKEEIQENEEAVKKMLVEATREFEEVVVDESPPDFEIHITMC
D
DDPPTPEEDSETQPDEEEEEEEEKVSQPEVGAAIKIIRQLMEKFNLDLSTVTQAFLKNSGELEATSAFL
A
SGQRADGYPIWSRQDDIDLQKDDEDTREALVKKFGAQNVARRIEFRKK




Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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