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Report for CCDS31548.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31548.1 Public Homo sapiens 11 OR5B17 24 110 108 CCDS HistoryNCBI Gene:219965Re-query CCDS DB by CCDS ID:31548.1Re-query CCDS DB by GeneID:219965See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31548.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357377.3 ENSP00000349945.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357377.3Link to Ensembl Protein Viewer:ENSP00000349945.3Re-query CCDS DB by Nucleotide ID:ENST00000357377Re-query CCDS DB by Protein ID:ENSP00000349945
Original member Current member NCBI NM_001005489.2 NP_001005489.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005489.2Link to Protein Sequence:NP_001005489.1Re-query CCDS DB by Nucleotide ID:NM_001005489Re-query CCDS DB by Protein ID:NP_001005489Link to BLAST:NP_001005489.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005489.1 314 Q8NGF7 314 100% 0 0

Chromosomal Locations for CCDS 31548.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 58358125 58359069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGAGAATAATACAGAGGTGAGTGAATTCATCCTGCTTGGTCTAACCAATGCCCCAGAACTACAGGTTC
CC
CTCTTTATCATGTTTACCCTCATCTACCTCATCACTCTGACTGGGAACCTGGGGATGATCATATTAAT
C
CTGCTGGACTCTCATCTCCACACTCCCATGTACTTTTTTCTCAGTAACCTGTCTCTTGCAGGCATTGGT
TAC
TCCTCAGCTGTCACTCCAAAGGTTTTAACTGGGTTGCTTATAGAAGACAAAGCCATCTCCTACAGTG
CC
TGTGCTGCTCAGATGTTCTTTTGTGCAGTCTTTGCCACTGTGGAAAATTACCTCTTGTCCTCAATGGC
C
TATGACCGCTACGCAGCAGTGTGTAACCCCCTACATTATACCACCACCATGACAACACGTGTGTGTGCT
TGT
CTGGCTATAGGCTGTTATGTCATTGGTTTTCTGAATGCTTCTATCCAAATTGGAGATACATTTCGCC
TC
TCTTTCTGCATGTCCAATGTGATTCATCACTTTTTCTGTGACAAACCAGCAGTCATTACTCTGACCTG
C
TCTGAGAAACACATTAGTGAGTTGATTCTTGTTCTTATATCAAGTTTTAATGTCTTTTTTGCACTTCTT
GTT
ACCTTGATTTCCTATCTGTTCATATTGATCACCATTCTTAAGAGGCACACAGGTAAGGGATACCAGA
AG
CCTTTATCTACCTGTGGTTCTCACCTCATTGCCATTTTCTTATTTTATATAACTGTCATCATCATGTA
C
ATACGACCAAGTTCCAGTCATTCCATGGACACAGACAAAATTGCATCTGTGTTCTACACTATGATCATC
CCC
ATGCTCAGTCCTATAGTCTATACCCTGAGGAACAAAGACGTGAAGAATGCATTCATGAAGGTTGTTG
AG
AAGGCAAAATATTCTCTAGATTCAGTCTTTTAA


Translation (314 aa):
MENNTEVSEFILLGLTNAPELQVPLFIMFTLIYLITLTGNLGMIILILLDSHLHTPMYFFLSNLSLAGIG
Y
SSAVTPKVLTGLLIEDKAISYSACAAQMFFCAVFATVENYLLSSMAYDRYAAVCNPLHYTTTMTTRVCA
C
LAIGCYVIGFLNASIQIGDTFRLSFCMSNVIHHFFCDKPAVITLTCSEKHISELILVLISSFNVFFALL
V
TLISYLFILITILKRHTGKGYQKPLSTCGSHLIAIFLFYITVIIMYIRPSSSHSMDTDKIASVFYTMII
P
MLSPIVYTLRNKDVKNAFMKVVEKAKYSLDSVF




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser