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Report for CCDS11573.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11573.1 Public Homo sapiens 17 LUC7L3 24 110 108 CCDS HistoryNCBI Gene:51747Re-query CCDS DB by CCDS ID:11573.1Re-query CCDS DB by GeneID:51747See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11573.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000240304.5 ENSP00000240304.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000240304.5Link to Ensembl Protein Viewer:ENSP00000240304.1Re-query CCDS DB by Nucleotide ID:ENST00000240304Re-query CCDS DB by Protein ID:ENSP00000240304
Original member Current member EBI ENST00000505658.6 ENSP00000425092.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000505658.6Link to Ensembl Protein Viewer:ENSP00000425092.1Re-query CCDS DB by Nucleotide ID:ENST00000505658Re-query CCDS DB by Protein ID:ENSP00000425092
Original member Current member NCBI NM_006107.4 NP_006098.2 Accepted alive Link to Nucleotide Sequence:NM_006107.4Link to Protein Sequence:NP_006098.2Re-query CCDS DB by Nucleotide ID:NM_006107Re-query CCDS DB by Protein ID:NP_006098Link to BLAST:NP_006098.2
Original member Current member NCBI NM_016424.5 NP_057508.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016424.5Link to Protein Sequence:NP_057508.2Re-query CCDS DB by Nucleotide ID:NM_016424Re-query CCDS DB by Protein ID:NP_057508Link to BLAST:NP_057508.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006098.2 432 O95232-1 432 100% 0 0
NP_057508.2 432 O95232-1 432 100% 0 0

Chromosomal Locations for CCDS 11573.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 50719733 50719831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50736960 50737026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50740306 50740345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50741102 50741246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50741657 50741731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50743706 50743810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50744652 50744813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50745720 50746003 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50746542 50746702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 50750501 50750661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1299 nt):
ATGATTTCGGCCGCGCAGTTGTTGGATGAGTTAATGGGCCGGGACCGAAACCTAGCCCCGGACGAGAAGC
GCAGCAACGTGCGGTGGGACCACGAGAGCGTTTGTAAATATTATCTCTGTGGTTTTTGTCCTGCGGAATT
GTTCACAAATACACGTTCTGATCTTGGTCCGTGTGAAAAAATTCATGATGAAAATCTACGAAAACAGTAT
GAGAAGAGCTCTCGTTTCATGAAAGTTGGCTATGAGAGAGATTTTTTGCGATACTTACAGAGCTTACTTG
CAGAAGTAGAACGTAGGATCAGACGAGGCCATGCTCGTTTGGCATTATCTCAAAACCAGCAGTCTTCTGG
GGCCGCTGGCCCAACAGGCAAAAATGAAGAAAAAATTCAGGTTCTAACAGACAAAATTGATGTACTTCTG
CAACAGATTGAAGAATTAGGGTCTGAAGGAAAAGTAGAAGAAGCCCAGGGGATGATGAAATTAGTTGAGC
AATTAAAAGAAGAGAGAGAACTGCTAAGGTCCACAACGTCGACAATTGAAAGCTTTGCTGCACAAGAAAA
ACAAATGGAAGTTTGTGAAGTATGTGGAGCCTTTTTAATAGTAGGAGATGCCCAGTCCCGGGTAGATGAC
CATTTGATGGGAAAACAACACATGGGCTATGCCAAAATTAAAGCTACTGTAGAAGAATTAAAAGAAAAGT
TAAGGAAAAGAACCGAAGAACCTGATCGTGATGAGCGTCTAAAAAAGGAGAAGCAAGAAAGAGAAGAAAG
AGAAAAAGAACGGGAGAGAGAAAGGGAAGAAAGAGAAAGGAAAAGACGAAGGGAAGAGGAAGAAAGAGAA
AAAGAAAGGGCTCGTGACAGAGAAAGAAGAAAGAGAAGTCGTTCACGAAGTAGACACTCAAGCCGAACAT
CAGACAGAAGATGCAGCAGGTCTCGGGACCACAAAAGGTCACGAAGTAGAGAAAGAAGGCGGAGCAGAAG
TAGAGATCGACGAAGAAGCAGAAGCCATGATCGATCAGAAAGAAAACACAGATCTCGAAGTCGGGATCGA
AGAAGATCAAAAAGCCGGGATCGAAAGTCATATAAGCACAGGAGCAAAAGTCGGGACAGAGAACAAGATA
GAAAATCCAAGGAGAAAGAAAAGAGGGGATCTGATGATAAAAAAAGTAGTGTGAAGTCCGGTAGTCGAGA
AAAGCAGAGTGAAGACACAAACACTGAATCGAAGGAAAGTGATACTAAGAATGAGGTCAATGGGACCAGT
GAAGACATTAAATCTGAAGGTGACACTCAGTCCAATTAA

Translation (432 aa):
MISAAQLLDELMGRDRNLAPDEKRSNVRWDHESVCKYYLCGFCPAELFTNTRSDLGPCEKIHDENLRKQY
EKSSRFMKVGYERDFLRYLQSLLAEVERRIRRGHARLALSQNQQSSGAAGPTGKNEEKIQVLTDKIDVLL
QQIEELGSEGKVEEAQGMMKLVEQLKEERELLRSTTSTIESFAAQEKQMEVCEVCGAFLIVGDAQSRVDD
HLMGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEERE
KERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDR
RRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTESKESDTKNEVNGTS
EDIKSEGDTQSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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