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Report for CCDS31562.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31562.1 Public Homo sapiens 11 OR4D6 24 110 108 CCDS HistoryNCBI Gene:219983Re-query CCDS DB by CCDS ID:31562.1Re-query CCDS DB by GeneID:219983See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31562.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300127.3 ENSP00000300127.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300127.3Link to Ensembl Protein Viewer:ENSP00000300127.2Re-query CCDS DB by Nucleotide ID:ENST00000300127Re-query CCDS DB by Protein ID:ENSP00000300127
Original member Current member NCBI NM_001004708.1 NP_001004708.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004708.1Link to Protein Sequence:NP_001004708.1Re-query CCDS DB by Nucleotide ID:NM_001004708Re-query CCDS DB by Protein ID:NP_001004708Link to BLAST:NP_001004708.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004708.1 314 Q8NGJ1 314 100% 0 0

Chromosomal Locations for CCDS 31562.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 59456961 59457905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGACCAGATCAACCACACTAATGTGAAGGAGTTTTTCTTCCTGGAACTTACACGTTCCCGAGAGCTGG
AGTTTTTCTTGTTTGTGGTCTTCTTTGCTGTGTATGTAGCAACAGTCCTGGGAAATGCACTCATTGTGGT
CACTATTACCTGTGAGTCCCGCCTACACACTCCTATGTACTTTCTCCTGCGGAACAAATCAGTCCTGGAC
ATCGTTTTTTCATCTATCACCGTCCCCAAGTTCCTGGTGGATCTTTTATCAGACAGGAAAACCATCTCCT
ACAATGACTGCATGGCACAGATCTTTTTCTTCCACTTTGCTGGTGGGGCAGATATTTTTTTCCTCTCTGT
GATGGCCTATGACAGATACCTTGCAATCGCCAAGCCCCTGCACTATGTGACCATGATGAGGAAAGAGGTG
TGGGTGGCCTTGGTGGTGGCTTCTTGGGTGAGTGGTGGTTTGCATTCAATCATCCAGGTAATTCTGATGC
TTCCATTCCCCTTCTGTGGCCCCAACACACTGGATGCCTTCTACTGTTATGTGCTCCAGGTGGTAAAACT
GGCCTGCACTGACACCTTTGCTTTGGAGCTTTTCATGATCTCTAACAACGGACTGGTGACCCTGCTCTGG
TTCCTCCTGCTCCTGGGCTCCTACACTGTCATTCTGGTGATGCTGAGATCCCACTCTGGGGAGGGGCGGA
ACAAGGCCCTCTCCACGTGCACGTCCCACATGCTGGTGGTGACTCTTCACTTCGTGCCTTGTGTTTACAT
CTACTGCCGGCCCTTCATGACGCTGCCCATGGACACAACCATATCCATTAATAACACGGTCATTACCCCC
ATGCTGAACCCCATCATCTATTCCCTGAGAAATCAAGAGATGAAGTCAGCCATGCAGAGGCTGCAGAGGA
GACTTGGGCCTTCCGAGAGCAGAAAATGGGGGTGA

Translation (314 aa):
MDQINHTNVKEFFFLELTRSRELEFFLFVVFFAVYVATVLGNALIVVTITCESRLHTPMYFLLRNKSVLD
IVFSSITVPKFLVDLLSDRKTISYNDCMAQIFFFHFAGGADIFFLSVMAYDRYLAIAKPLHYVTMMRKEV
WVALVVASWVSGGLHSIIQVILMLPFPFCGPNTLDAFYCYVLQVVKLACTDTFALELFMISNNGLVTLLW
FLLLLGSYTVILVMLRSHSGEGRNKALSTCTSHMLVVTLHFVPCVYIYCRPFMTLPMDTTISINNTVITP
MLNPIIYSLRNQEMKSAMQRLQRRLGPSESRKWG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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