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Report for CCDS31368.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31368.1 Public Homo sapiens 11 OR51A2 24 110 108 CCDS HistoryNCBI Gene:401667Re-query CCDS DB by CCDS ID:31368.1Re-query CCDS DB by GeneID:401667See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 31368.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000380371.1 ENSP00000369729.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000380371.1Link to Ensembl Protein Viewer:ENSP00000369729.1Re-query CCDS DB by Nucleotide ID:ENST00000380371Re-query CCDS DB by Protein ID:ENSP00000369729
Original member Current member NCBI NM_001004748.1 NP_001004748.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004748.1Link to Protein Sequence:NP_001004748.1Re-query CCDS DB by Nucleotide ID:NM_001004748Re-query CCDS DB by Protein ID:NP_001004748Link to BLAST:NP_001004748.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004748.1 313 Q8NGJ7 313 100% 0 0

Chromosomal Locations for CCDS 31368.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 4954772 4955713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGTCCATTATCAACACATCATATGTTGAAATCACCACCTTCTTCTTGGTTGGGATGCCAGGGCTAGAAT
ATGCACACATCTGGATCTCTATCCCCATCTGCAGCATGTATCTTATTGCTATTCTAGGAAATGGCACCAT
TCTTTTTATCATCAAGACAGAGCCCTCCTTGCATGGGCCCATGTACTATTTTCTTTCCATGTTGGCTATG
TCAGACTTGGGTTTGTCTTTATCATCTCTGCCCACTGTGTTAAGCATCTTCCTGTTCAATGCCCCTGAAA
CTTCTTCTAGTGCCTGCTTTGCCCAGGAATTCTTCATTCATGGATTCTCAGTACTGGAGTCCTCAGTCCT
CCTGATCATGTCATTTGATAGATTCCTAGCCATCCACAATCCTCTGAGATACACCTCAATCCTGACAACT
GTCAGAGTTGCCCAAATAGGGATAGTATTCTCCTTTAAGAGCATGCTCCTGGTTCTTCCCTTCCCTTTCA
CTTTAAGAAGCTTGAGATATTGCAAGAAAAACCAATTATCCCATTCCTACTGTCTCCACCAGGATGTCAT
GAAGTTGGCCTGTTCTGACAACAGAATTGATGTTATCTATGGCTTTTTTGGAGCACTCTGCCTTATGGTA
GACTTTATTCTCATTGCTGTGTCTTACACCCTGATCCTCAAGACTGTACCGGGAATTGCATCCAAAAAGG
AGGAGCTTAAGGCTCTCAATACTTGTGTTTCACACATCTGTGCAGTGATCATCTTCTACCTGCCCATCAT
CAACCTGGCCGTTGTCCACCGCTTTGCCGGGCATGTCTCTCCCCTCATTAATGTTCTCATGGCAAATGTT
CTCCTACTTGTACCTCCGCTGATGAAACCAATTGTTTATTGTGTAAAAACTAAACAGATTAGAGTGAGAG
TTGTAGCAAAATTGTGTCAATGGAAGATTTAA

Translation (313 aa):
MSIINTSYVEITTFFLVGMPGLEYAHIWISIPICSMYLIAILGNGTILFIIKTEPSLHGPMYYFLSMLAM
SDLGLSLSSLPTVLSIFLFNAPETSSSACFAQEFFIHGFSVLESSVLLIMSFDRFLAIHNPLRYTSILTT
VRVAQIGIVFSFKSMLLVLPFPFTLRSLRYCKKNQLSHSYCLHQDVMKLACSDNRIDVIYGFFGALCLMV
DFILIAVSYTLILKTVPGIASKKEELKALNTCVSHICAVIIFYLPIINLAVVHRFAGHVSPLINVLMANV
LLLVPPLMKPIVYCVKTKQIRVRVVAKLCQWKI


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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