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Report for CCDS7780.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7780.1 Public Homo sapiens 11 CYB5R2 24 110 108 CCDS HistoryNCBI Gene:51700Re-query CCDS DB by CCDS ID:7780.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7780.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299498.11 ENSP00000299498.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000299498.11Link to Ensembl Protein Viewer:ENSP00000299498.6Re-query CCDS DB by Nucleotide ID:ENST00000299498Re-query CCDS DB by Protein ID:ENSP00000299498
Original member Current member EBI ENST00000533558.5 ENSP00000437041.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533558.5Link to Ensembl Protein Viewer:ENSP00000437041.1Re-query CCDS DB by Nucleotide ID:ENST00000533558Re-query CCDS DB by Protein ID:ENSP00000437041
Original member Current member NCBI NM_001302826.2 NP_001289755.1 Accepted alive Link to Nucleotide Sequence:NM_001302826.2Link to Protein Sequence:NP_001289755.1Re-query CCDS DB by Nucleotide ID:NM_001302826Re-query CCDS DB by Protein ID:NP_001289755Link to BLAST:NP_001289755.1
Original member Current member NCBI NM_016229.5 NP_057313.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016229.5Link to Protein Sequence:NP_057313.2Re-query CCDS DB by Nucleotide ID:NM_016229Re-query CCDS DB by Protein ID:NP_057313Link to BLAST:NP_057313.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001289755.1 276 Q6BCY4-1 276 100% 0 0
NP_057313.2 276 Q6BCY4-1 276 100% 0 0

Chromosomal Locations for CCDS 7780.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 7665374 7665546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7666451 7666550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7667728 7667813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7668478 7668561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7669205 7669334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7669625 7669731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7672451 7672523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 7672748 7672825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGAACTCCAGGAGGAGAGAGCCAATCACCTTACAGGACCCTGAAGCCAAGTACCCGCTGCCCTTGATTG
AGAAAGAGAAAATCAGCCACAACACCCGGAGGTTCCGCTTTGGACTGCCTTCGCCGGACCATGTCTTAGG
GCTTCCTGTAGGTAACTATGTCCAGCTCTTGGCAAAAATCGATAATGAATTGGTGGTCAGGGCTTACACC
CCTGTCTCCAGTGATGATGACAGAGGCTTTGTGGACCTAATTATAAAGATCTACTTCAAAAATGTACACC
CCCAATATCCTGAAGGTGGGAAGATGACTCAGTATTTGGAGAACATGAAAATCGGGGAGACCATCTTTTT
TCGAGGGCCAAGGGGACGCTTGTTTTACCATGGGCCAGGGAATCTTGGAATCAGACCAGACCAGACGAGT
GAGCCTAAAAAAACACTGGCCGATCACCTGGGAATGATTGCTGGGGGCACAGGCATCACACCCATGTTGC
AGCTCATTCGCCACATCACCAAGGACCCCAGTGACAGGACCAGGATGTCCCTCATCTTTGCCAACCAGAC
AGAGGAGGATATCTTGGTCAGAAAAGAGCTTGAAGAAATTGCCAGGACTCACCCAGACCAGTTCAACCTG
TGGTACACCCTGGACAGGCCTCCCATTGGCTGGAAGTACAGCTCAGGCTTCGTTACTGCCGACATGATCA
AGGAGCACCTTCCTCCTCCAGCGAAGTCCACGCTCATCCTGGTGTGTGGCCCGCCACCACTAATCCAGAC
GGCGGCTCACCCTAACCTGGAGAAGCTGGGTTATACCCAGGACATGATTTTCACCTACTAA

Translation (276 aa):
MNSRRREPITLQDPEAKYPLPLIEKEKISHNTRRFRFGLPSPDHVLGLPVGNYVQLLAKIDNELVVRAYT
PVSSDDDRGFVDLIIKIYFKNVHPQYPEGGKMTQYLENMKIGETIFFRGPRGRLFYHGPGNLGIRPDQTS
EPKKTLADHLGMIAGGTGITPMLQLIRHITKDPSDRTRMSLIFANQTEEDILVRKELEEIARTHPDQFNL
WYTLDRPPIGWKYSSGFVTADMIKEHLPPPAKSTLILVCGPPPLIQTAAHPNLEKLGYTQDMIFTY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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