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Report for CCDS31699.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31699.1 Public Homo sapiens 11 OR4D5 24 110 108 CCDS HistoryNCBI Gene:219875Re-query CCDS DB by CCDS ID:31699.1Re-query CCDS DB by GeneID:219875See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31699.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307033.3 ENSP00000305970.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307033.3Link to Ensembl Protein Viewer:ENSP00000305970.2Re-query CCDS DB by Nucleotide ID:ENST00000307033Re-query CCDS DB by Protein ID:ENSP00000305970
Original member Current member NCBI NM_001001965.1 NP_001001965.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001001965.1Link to Protein Sequence:NP_001001965.1Re-query CCDS DB by Nucleotide ID:NM_001001965Re-query CCDS DB by Protein ID:NP_001001965Link to BLAST:NP_001001965.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001965.1 318 Q8NGN0 318 100% 0 0

Chromosomal Locations for CCDS 31699.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 123939617 123940573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (957 nt):
ATGAATCCAGCAAATCATTCCCAGGTGGCAGGATTTGTTCTACTGGGGCTCTCTCAGGTTTGGGAGCTTC
GGTTTGTTTTCTTCACTGTTTTCTCTGCTGTGTATTTTATGACTGTAGTGGGAAACCTTCTTATTGTGGT
CATAGTGACCTCCGACCCACACCTGCACACAACCATGTATTTTCTCTTGGGCAATCTTTCTTTCCTGGAC
TTTTGCTACTCTTCCATCACAGCACCTAGGATGCTGGTTGACTTGCTCTCAGGCAACCCTACCATTTCCT
TTGGTGGATGCCTGACTCAACTCTTCTTCTTCCACTTCATTGGAGGCATCAAGATCTTCCTGCTGACTGT
CATGGCGTATGACCGCTACATTGCCATTTCCCAGCCCCTGCACTACACGCTCATTATGAATCAGACTGTC
TGTGCACTCCTTATGGCAGCCTCCTGGGTGGGGGGCTTCATCCACTCCATAGTACAGATTGCATTGACTA
TCCAGCTGCCATTCTGTGGGCCTGACAAGCTGGACAACTTTTATTGTGATGTGCCTCAGCTGATCAAATT
GGCCTGCACAGATACCTTTGTCTTAGAGCTTTTAATGGTGTCTAACAATGGCCTGGTGACCCTGATGTGT
TTTCTGGTGCTTCTGGGATCGTACACAGCACTGCTAGTCATGCTCCGAAGCCACTCACGGGAGGGCCGCA
GCAAGGCCCTGTCTACCTGTGCCTCTCACATTGCTGTGGTGACCTTAATCTTTGTGCCTTGCATCTACGT
CTATACAAGGCCTTTTCGGACATTCCCCATGGACAAGGCCGTCTCTGTGCTATACACAATTGTCACCCCC
ATGCTGAATCCTGCCATCTATACCCTGAGAAACAAGGAAGTGATCATGGCCATGAAGAAGCTGTGGAGGA
GGAAAAAGGACCCTATTGGTCCCCTGGAGCACAGACCCTTACATTAG

Translation (318 aa):
MNPANHSQVAGFVLLGLSQVWELRFVFFTVFSAVYFMTVVGNLLIVVIVTSDPHLHTTMYFLLGNLSFLD
FCYSSITAPRMLVDLLSGNPTISFGGCLTQLFFFHFIGGIKIFLLTVMAYDRYIAISQPLHYTLIMNQTV
CALLMAASWVGGFIHSIVQIALTIQLPFCGPDKLDNFYCDVPQLIKLACTDTFVLELLMVSNNGLVTLMC
FLVLLGSYTALLVMLRSHSREGRSKALSTCASHIAVVTLIFVPCIYVYTRPFRTFPMDKAVSVLYTIVTP
MLNPAIYTLRNKEVIMAMKKLWRRKKDPIGPLEHRPLH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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