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Report for CCDS40694.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40694.1 Public Mus musculus 9 Gfral 23 108 98 CCDS HistoryNCBI Gene:404194Re-query CCDS DB by CCDS ID:40694.1Re-query CCDS DB by GeneID:404194See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40694.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074880.5 ENSMUSP00000074421.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074880.5Link to Ensembl Protein Viewer:ENSMUSP00000074421.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000074880Re-query CCDS DB by Protein ID:ENSMUSP00000074421
Original member NCBI NM_205844.3 NP_995316.2 Updated not alive Link to Nucleotide Sequence:NM_205844.3Link to Protein Sequence:NP_995316.2Re-query CCDS DB by Nucleotide ID:NM_205844Re-query CCDS DB by Protein ID:NP_995316
Current member NCBI NM_205844.4 NP_995316.2 Accepted alive Link to Nucleotide Sequence:NM_205844.4Link to Protein Sequence:NP_995316.2Re-query CCDS DB by Nucleotide ID:NM_205844Re-query CCDS DB by Protein ID:NP_995316Link to BLAST:NP_995316.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_995316.2 393 Q6SJE0-1 393 100% 0 0

Chromosomal Locations for CCDS 40694.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 76164805 76164868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76167044 76167116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76167998 76168090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76193203 76193453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76197028 76197358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76198934 76198993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76205338 76205490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76208534 76208668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76213441 76213462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1182 nt):
ATGCTAGTGTTCATTTTCCTGGCTGTTACGTTAAGCTCAGAAAATGAATCCTCTTCCCAAACAAATGATT
GTGCACATTTAATACAGAAATGCTTGATTGATGCAAATGGCTGTGAGCAGTCATGGAGATCAATGGAAGA
CACCTGCCTTACTCCAGGTGACTCCTGCAAGATAAATAATTCACTACATTGTAACCTGAGTATCCAGGCT
TTGGTGGAAAAAAATTTCCAATTTAAAGAGTGTCTTTGTATGGATGACCTCCACTGTACAGTAAACAAAC
TTTTTGGAAAAAAGTGCACCAATAAGACAGATAACATGGAAAAGGACAATAAAGATAAATGGAATCTAAC
TACTACTCCTTTCTATCATGGATTCAAACAGATGCAGTCTTGTTTGGAGGTGACAGAGGCGTGTGTAGGG
GATGTGGTTTGTAATGCACAGTTGGCCCTTTACCTTAAAGCATGCTCAGCAAATGGAAATCTGTGTGATG
TGAAACACTGCCAAGCAGCCATACGGTTCTTCTATCAAAATATGCCTTTTAACACTGCCCAGATGTTGGC
TTTTTGTGACTGTGCTCAATCTGATATACCCTGTCAGCAATCCAAAGAAACTCTTCACAGCAAGCCATGT
GCACTGAATATAGTTCCACCCCCCACTTGCCTCAGTGTAATTCACACTTGCCGAAATGATGAATTATGCA
GGACACACTACCGAACATTCCAGACAGAATGCTGGCCCCACATAACTGGGAAGTGCCATGAAGATGAGAC
CTGCATTAGCATGTTAGGCAAGCAAGACCTTACTTGTTCTGGGAGTGAGAGCTGCAGGGCTGCCTTCCTA
GGAACCTTTGGGACAGTCCTGCAAGTACCCTGTGCTTGCAGGGGCGTTACACAGGCTGAAGAACACGTGT
GCATGATTTTCCAGCACATGCTTCATAGCAAATCGTGTTTCAATTACCCAACTCCTAATGTCAAAGACAT
TTCCTCATATGAAAAAAAGAATTCAAAAGAAATTACTCTGACTGGATTCAATTCTTTCTTCAATGGAGAA
CTACTCTATGTTGTTGTGTGCATGGCAGTTACCTGTGGAATTCTTTTCTTGGTGATGCTCAAGTTAAGGA
TACAAAGTGAAAAAAGAGATCCCTCATCCATCGAAATAGCTGGAGGTGTCATCATTCAGTGA

Translation (393 aa):
MLVFIFLAVTLSSENESSSQTNDCAHLIQKCLIDANGCEQSWRSMEDTCLTPGDSCKINNSLHCNLSIQA
LVEKNFQFKECLCMDDLHCTVNKLFGKKCTNKTDNMEKDNKDKWNLTTTPFYHGFKQMQSCLEVTEACVG
DVVCNAQLALYLKACSANGNLCDVKHCQAAIRFFYQNMPFNTAQMLAFCDCAQSDIPCQQSKETLHSKPC
ALNIVPPPTCLSVIHTCRNDELCRTHYRTFQTECWPHITGKCHEDETCISMLGKQDLTCSGSESCRAAFL
GTFGTVLQVPCACRGVTQAEEHVCMIFQHMLHSKSCFNYPTPNVKDISSYEKKNSKEITLTGFNSFFNGE
LLYVVVCMAVTCGILFLVMLKLRIQSEKRDPSSIEIAGGVIIQ


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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