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Report for CCDS25543.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
25543.1 Public Mus musculus 11 Ace 23 108 98 CCDS HistoryNCBI Gene:11421Re-query CCDS DB by CCDS ID:25543.1Re-query CCDS DB by GeneID:11421See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 25543.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000001963.13 ENSMUSP00000001963.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000001963.13Link to Ensembl Protein Viewer:ENSMUSP00000001963.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000001963Re-query CCDS DB by Protein ID:ENSMUSP00000001963
Original member Current member NCBI NM_207624.6 NP_997507.1 Accepted alive Link to Nucleotide Sequence:NM_207624.6Link to Protein Sequence:NP_997507.1Re-query CCDS DB by Nucleotide ID:NM_207624Re-query CCDS DB by Protein ID:NP_997507Link to BLAST:NP_997507.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997507.1 1312 P09470-1 1312 100% 0 0

Chromosomal Locations for CCDS 25543.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 105967982 105968245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105968907 105969074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105969701 105969794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105970553 105970696 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105971292 105971483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105972017 105972114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105972361 105972533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105972861 105973084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105973392 105973536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105973779 105973877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105974104 105974226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105974667 105974878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105975536 105975672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105976545 105976703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105976952 105977039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105979170 105979313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105979481 105979672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105981498 105981595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105981768 105981940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105985045 105985268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105985573 105985717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105985990 105986088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105988016 105988138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105988429 105988616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105988802 105989034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3939 nt):
ATGGGGGCCGCGTCCGGCCAGCGGGGGCGGTGGCCGTTGTCGCCTCCGCTCTTGATGCTGTCGCTGCTGG
TGCTGTTGCTGCAGCCGTCGCCCGCCCCGGCACTCGACCCTGGATTGCAGCCGGGCAACTTTTCCCCGGA
CGAGGCAGGGGCGCAGCTTTTCGCTGAAAGCTATAACTCGAGTGCCGAGGTGGTGATGTTCCAGAGCACC
GTGGCCAGTTGGGCGCACGACACCAACATCACGGAGGAGAACGCGCGACGCCAGGAGGAAGCGGCCCTGG
TCAGCCAGGAGTTTGCAGAGGTCTGGGGCAAGAAGGCCAAGGAGTTGTATGAGTCCATTTGGCAGAACTT
TACTGACTCAAAGCTGCGAAGGATCATCGGATCTATTCGGACCCTAGGACCTGCCAATCTGCCCCTGGCC
CAGCGGCAGCAGTACAACTCTCTGCTAAGCAACATGAGCAGAATCTACTCCACTGGCAAGGTCTGCTTCC
CCAACAAGACTGCCACCTGCTGGTCCCTGGACCCAGAGCTCACCAACATCCTGGCTTCCTCACGAAGCTA
TGCCAAGTTGTTGTTTGCCTGGGAGGGCTGGCATGATGCTGTGGGTATCCCACTGAAACCCCTCTATCAA
GACTTTACTGCCATCAGTAACGAAGCCTACAGACAAGACGACTTCTCAGACACAGGAGCCTTCTGGCGCT
CCTGGTATGAGTCCCCCTCCTTTGAGGAGAGTCTGGAACATATCTACCACCAACTAGAGCCCCTCTACCT
GAACCTCCATGCCTACGTCCGCCGCGCACTGCACCGCCGCTATGGGGACAAATACGTCAATCTCAGGGGG
CCTATTCCTGCCCATTTGCTGGGAGACATGTGGGCCCAGAGCTGGGAGAACATCTACGACATGGTAGTGC
CTTTCCCAGACAAACCCAACCTCGATGTCACCAGTACAATGGTACAGAAGGGCTGGAACGCCACACACAT
GTTCCGGGTATCAGAGGAATTCTTCACCTCGCTGGGGCTCTCACCCATGCCTCCTGAGTTCTGGGCGGAG
TCAATGCTGGAGAAACCAACGGATGGACGGGAGGTGGTGTGCCACGCCTCTGCCTGGGACTTCTACAACC
GGAAGGACTTCCGGATTAAGCAATGCACACGGGTCACGATGGAACAGCTGGCCACAGTACACCACGAGAT
GGGCCACGTGCAGTACTACCTCCAGTACAAGGACCTGCACGTCTCTCTGCGTAGAGGTGCCAACCCTGGC
TTCCATGAGGCCATTGGGGATGTGCTTGCACTCTCCGTCTCTACCCCTGCACATCTGCACAAAATCGGCC
TACTGGACCATGTTACCAATGACATAGAGAGTGACATCAATTACCTGCTAAAGATGGCCCTAGAGAAAAT
CGCCTTCTTGCCCTTTGGCTACCTGGTGGACCAGTGGCGTTGGGGGGTCTTCAGTGGACGGACCCCACCC
TCTCGCTACAACTTCGACTGGTGGTATCTTCGAACCAAGTATCAGGGGATCTGCCCACCAGTTGCCCGGA
ATGAAACCCATTTTGATGCTGGAGCCAAGTTTCACATCCCAAACGTGACACCGTACATCAGGTACTTCGT
GAGCTTTGTGCTGCAGTTCCAGTTCCATCAAGCACTGTGCAAGGAGGCAGGCCACCAGGGCCCACTACAC
CAGTGTGACATCTACCAGTCCGCCCAGGCGGGGGCCAAGCTCAAGCAGGTGTTGCAGGCTGGCTGCTCCA
GGCCCTGGCAGGAGGTACTGAAGGACCTGGTAGGCTCAGATGCCCTGGATGCCAAGGCACTGCTGGAGTA
CTTCCAACCGGTCAGCCAGTGGCTGGAAGAGCAGAATCAGCGGAATGGCGAAGTCCTAGGCTGGCCAGAG
AATCAGTGGCGTCCACCGTTACCCGACAACTATCCAGAGGGCATTGACCTAGAGACTGATGAAGCCAAGG
CTGACAGGTTCGTGGAAGAGTATGACCGGACAGCCCAAGTGTTGTTGAACGAGTACGCAGAGGCCAACTG
GCAATATAACACCAACATTACCATAGAGGGCAGCAAGATCCTGCTTGAGAAAAGCACGGAGGTATCCAAT
CACACCCTGAAATATGGCACCCGGGCCAAGACATTTGATGTGAGCAACTTTCAAAACTCTTCCATCAAGC
GGATCATAAAGAAGCTTCAGAACCTGGACCGGGCAGTGCTGCCTCCCAAGGAATTAGAAGAGTACAACCA
GATCCTGCTAGACATGGAGACAACTTACAGCTTATCCAACATTTGCTACACAAATGGCACTTGTATGCCC
CTGGAACCTGATCTAACAAACATGATGGCCACATCCCGGAAATATGAAGAATTGCTATGGGCATGGAAGA
GCTGGAGAGACAAGGTGGGGAGAGCCATCCTTCCTTTTTTCCCAAAGTATGTGGAGTTCTCCAACAAGAT
TGCCAAGCTCAATGGCTACACGGATGCAGGGGATTCATGGAGATCCTTATACGAGTCTGACAACCTGGAG
CAAGACCTGGAAAAACTGTACCAGGAGCTGCAGCCACTCTACCTGAACCTGCATGCCTATGTGCGTCGTT
CCCTGCACCGCCACTATGGGTCCGAGTACATCAACCTGGATGGCCCCATTCCTGCCCATCTGCTAGGGAA
CATGTGGGCGCAGACCTGGTCCAACATCTATGATTTGGTGGCGCCCTTCCCTTCCGCCCCCAATATAGAT
GCCACGGAAGCCATGATAAAGCAGGGATGGACACCCAGAAGGATATTTAAGGAAGCTGACAATTTCTTTA
CCTCCCTGGGGCTGTTACCTGTGCCCCCTGAGTTCTGGAACAAGTCGATGTTAGAGAAGCCCACCGATGG
AAGGGAGGTGGTGTGCCATCCCTCAGCCTGGGACTTCTACAACGGCAAGGACTTCAGGATCAAGCAGTGT
ACCTCTGTGAACATGGAGGACTTGGTGATAGCGCACCACGAAATGGGCCACATCCAGTATTTCATGCAGT
ACAAAGACTTACCCGTGACTTTCCGGGAGGGTGCCAACCCTGGTTTTCATGAAGCTATTGGAGATATAAT
GGCTCTCTCAGTGTCTACCCCCAAGCATCTATACAGTCTCAACCTGCTTAGCACTGAGGGCAGTGGCTAC
GAGTATGACATCAACTTTCTAATGAAGATGGCCCTCGACAAGATCGCCTTTATCCCCTTCAGCTACCTCA
TCGACCAGTGGCGCTGGAGGGTCTTTGATGGAAGCATCACCAAGGAGAACTATAACCAGGAGTGGTGGAG
CCTCAGGCTGAAGTATCAGGGTCTGTGCCCCCCAGTGCCAAGATCCCAAGGTGACTTTGACCCAGGGTCC
AAGTTCCACGTTCCTGCGAACGTGCCATACGTCAGGTACTTTGTCAGCTTCATCATCCAGTTCCAGTTCC
ACGAGGCGCTGTGTCGCGCAGCCGGGCACACGGGTCCCCTGCACAAGTGTGACATCTACCAATCCAAGGA
AGCAGGGAAGCTCCTGGCGGATGCCATGAAGCTGGGCTACAGTAAGCCGTGGCCAGAGGCCATGAAGCTG
ATCACAGGCCAGCCTAACATGTCAGCCTCCGCCATGATGAATTACTTCAAGCCACTGACAGAATGGCTCG
TCACCGAGAACAGGAGACATGGAGAGACACTGGGCTGGCCGGAGTACAACTGGGCGCCAAACACCGCTCG
CGCAGAAGGCTCCACCGCAGAGTCCAACCGCGTCAATTTCCTGGGCCTGTACCTGGAGCCACAGCAGGCC
CGCGTGGGCCAGTGGGTGCTGCTCTTCCTGGGCGTCGCCCTGCTCGTGGCCACCGTGGGTCTCGCCCATC
GGCTCTACAACATCCGTAACCATCACAGCCTCCGCCGGCCCCACCGTGGGCCCCAGTTTGGGTCTGAGGT
GGAGCTCAGACACTCCTGA

Translation (1312 aa):
MGAASGQRGRWPLSPPLLMLSLLVLLLQPSPAPALDPGLQPGNFSPDEAGAQLFAESYNSSAEVVMFQST
VASWAHDTNITEENARRQEEAALVSQEFAEVWGKKAKELYESIWQNFTDSKLRRIIGSIRTLGPANLPLA
QRQQYNSLLSNMSRIYSTGKVCFPNKTATCWSLDPELTNILASSRSYAKLLFAWEGWHDAVGIPLKPLYQ
DFTAISNEAYRQDDFSDTGAFWRSWYESPSFEESLEHIYHQLEPLYLNLHAYVRRALHRRYGDKYVNLRG
PIPAHLLGDMWAQSWENIYDMVVPFPDKPNLDVTSTMVQKGWNATHMFRVSEEFFTSLGLSPMPPEFWAE
SMLEKPTDGREVVCHASAWDFYNRKDFRIKQCTRVTMEQLATVHHEMGHVQYYLQYKDLHVSLRRGANPG
FHEAIGDVLALSVSTPAHLHKIGLLDHVTNDIESDINYLLKMALEKIAFLPFGYLVDQWRWGVFSGRTPP
SRYNFDWWYLRTKYQGICPPVARNETHFDAGAKFHIPNVTPYIRYFVSFVLQFQFHQALCKEAGHQGPLH
QCDIYQSAQAGAKLKQVLQAGCSRPWQEVLKDLVGSDALDAKALLEYFQPVSQWLEEQNQRNGEVLGWPE
NQWRPPLPDNYPEGIDLETDEAKADRFVEEYDRTAQVLLNEYAEANWQYNTNITIEGSKILLEKSTEVSN
HTLKYGTRAKTFDVSNFQNSSIKRIIKKLQNLDRAVLPPKELEEYNQILLDMETTYSLSNICYTNGTCMP
LEPDLTNMMATSRKYEELLWAWKSWRDKVGRAILPFFPKYVEFSNKIAKLNGYTDAGDSWRSLYESDNLE
QDLEKLYQELQPLYLNLHAYVRRSLHRHYGSEYINLDGPIPAHLLGNMWAQTWSNIYDLVAPFPSAPNID
ATEAMIKQGWTPRRIFKEADNFFTSLGLLPVPPEFWNKSMLEKPTDGREVVCHPSAWDFYNGKDFRIKQC
TSVNMEDLVIAHHEMGHIQYFMQYKDLPVTFREGANPGFHEAIGDIMALSVSTPKHLYSLNLLSTEGSGY
EYDINFLMKMALDKIAFIPFSYLIDQWRWRVFDGSITKENYNQEWWSLRLKYQGLCPPVPRSQGDFDPGS
KFHVPANVPYVRYFVSFIIQFQFHEALCRAAGHTGPLHKCDIYQSKEAGKLLADAMKLGYSKPWPEAMKL
ITGQPNMSASAMMNYFKPLTEWLVTENRRHGETLGWPEYNWAPNTARAEGSTAESNRVNFLGLYLEPQQA
RVGQWVLLFLGVALLVATVGLAHRLYNIRNHHSLRRPHRGPQFGSEVELRHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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