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Report for CCDS48732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48732.1 Public Mus musculus 10 Or6c5 23 108 98 CCDS HistoryNCBI Gene:258232Re-query CCDS DB by CCDS ID:48732.1Re-query CCDS DB by GeneID:258232See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 48732.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000097164.2 ENSMUSP00000131609.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000097164.2Link to Ensembl Protein Viewer:ENSMUSP00000131609.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000097164Re-query CCDS DB by Protein ID:ENSMUSP00000131609
Original member Current member EBI ENSMUST00000203248.2 ENSMUSP00000145042.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000203248.2Link to Ensembl Protein Viewer:ENSMUSP00000145042.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000203248Re-query CCDS DB by Protein ID:ENSMUSP00000145042
Original member Current member NCBI NM_207620.1 NP_997503.1 Accepted alive Link to Nucleotide Sequence:NM_207620.1Link to Protein Sequence:NP_997503.1Re-query CCDS DB by Nucleotide ID:NM_207620Re-query CCDS DB by Protein ID:NP_997503Link to BLAST:NP_997503.1

Chromosomal Locations for CCDS 48732.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 129238151 129239089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGAAAAACCACTCTGTTATCACCGAGTTTCTGCTCTTGGGCATATCAGACACACCAGAACTTCAGTTTG
TGATTTTTATCTTTTTATTCATTGCTTACATATTAAGTGTCACTGGAAACCTAACCATCATCATCCTCAC
ATTGCTAGACTCTCAGTTAAAGACTCCTATGTACTTTTTCCTCCGGAATTTCTCCTTCTTAGAAATTATA
TTCACCAGTGTTTCAATCCCTAGATTTTTGGAGTCAATAATTACTAAAGTTAAGACTATTTCCTATAACA
ACTGTTTGGCTCAGTTATTTTTCTTCATCTCCATGGGAGTGTCTGAGTTCTTTCTTCTAACTGCTATGTC
TTATGATCGCTATGTAGCCATCTGCAAGCCTCTGCACTACACCCTCATCATGAATCAGAAAGTCTGCACC
CTTCTTGTCCTCACCTCATGGCTGGGAGGGTTTCTGACCATCTTTCCATTGCTCATGCTGTTTCTCAAGT
TAGATTTTTGTGCTTCAAATGTCATTGATCATTTCTGCTGTGACTACTTCCCCATCTTACAGCTCTCCTG
CTCAGATACATGGTTTTTAGAGACAATCGGCTTTTACTTTGCATTTATTACTCTGCTGTTCACACTGGCT
CTAGTGATCTTGTCATACATCTGCATCATCAACACCATTCTGAGGTTCCCATCTGCCAGTCAGAGGAAAA
AGGCTTTCTCCACCTGTTCCTCTCACATGATTGTCATCTCCATCTCTTATGGCAGCTGCATTTTCATGTA
TGTCAAACCTTCTGCAAATGAAAGAGCATCACTGACCAAAGGGGTGGCTCTTCTCAATACTTCAATTGCT
CCCATGCTGAACCCTTTTATTTACACCTTGAGAAATCAACAAGTAAAACAAGCCTTCAAGGATTTGATTA
ATAAACTAATGTTTAATAGAAACAAATGA

Translation (312 aa):
MKNHSVITEFLLLGISDTPELQFVIFIFLFIAYILSVTGNLTIIILTLLDSQLKTPMYFFLRNFSFLEII
FTSVSIPRFLESIITKVKTISYNNCLAQLFFFISMGVSEFFLLTAMSYDRYVAICKPLHYTLIMNQKVCT
LLVLTSWLGGFLTIFPLLMLFLKLDFCASNVIDHFCCDYFPILQLSCSDTWFLETIGFYFAFITLLFTLA
LVILSYICIINTILRFPSASQRKKAFSTCSSHMIVISISYGSCIFMYVKPSANERASLTKGVALLNTSIA
PMLNPFIYTLRNQQVKQAFKDLINKLMFNRNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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