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Report for CCDS21135.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21135.1 Public Mus musculus 7 Wtip 23 108 98 CCDS HistoryNCBI Gene:101543Re-query CCDS DB by CCDS ID:21135.1Re-query CCDS DB by GeneID:101543See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21135.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038537.8 ENSMUSP00000047623.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038537.8Link to Ensembl Protein Viewer:ENSMUSP00000047623.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000038537Re-query CCDS DB by Protein ID:ENSMUSP00000047623
Original member NCBI NM_207212.2 NP_997095.1 Updated not alive Link to Nucleotide Sequence:NM_207212.2Link to Protein Sequence:NP_997095.1Re-query CCDS DB by Nucleotide ID:NM_207212Re-query CCDS DB by Protein ID:NP_997095
Current member NCBI NM_207212.3 NP_997095.1 Accepted alive Link to Nucleotide Sequence:NM_207212.3Link to Protein Sequence:NP_997095.1Re-query CCDS DB by Nucleotide ID:NM_207212Re-query CCDS DB by Protein ID:NP_997095Link to BLAST:NP_997095.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997095.1 398 Q7TQJ8 398 100% 0 0

Chromosomal Locations for CCDS 21135.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 34110099 34110239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34116594 34116662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34117312 34117363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34118675 34118805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34118937 34118999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34119139 34119206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34125485 34125586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 34132489 34133059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1197 nt):
ATGCAGCGCTCGCGGACGGCCGCGGACGACGCGGCTCTGCTCCTGGCCGGGCTGGGCCTGCGCGAGTCGG
AGCCGACCGCCGGCTCCCCAGGGCGCGTGCGGCGCGGGCCGAGGGCCGTGGACGAGGCGGCGCCAGCGTC
GGGCCGCCGAGGCAAGGGTGGCTGCGGCGGCCCCGAGGCCGCGCCCGACGTCCCGAGCCGCCCCGAGCGA
GGCCCGCGCGCCAGCCTCGCGGGCTCGGACGGCGGCAGCGCGCGCTCGAGCGGTATCAGCCTGGGCTATG
ACCAGCGCCACGGCCCCGGCCCCGGGCCGCCGTCGGGGGGCAGCGCGCGCTCCAGCGTGTCCAGCCTGGG
TTCCCGTGGCTCAGCGGGCGCCTGTGCAGACCTGCTGCCGCCCGGCGTCGGCCCGGCGCCCGCCCGCTCT
CCGGAGCCTGCCCAGTTCCCCTTCCCGTTGCCGTCGCTGCCGCTGCCCCCGGGCCGGGAGGGCGGCCCGA
GTGCGGCCGAGCGGCGGCTGGAGGCGCTCACGCGGGAACTGGAGCGCGCGCTCGAGGCGCGCACGGCGCG
AGACTACTTTGGCATTTGTATCAAGTGTGGCCTTGGCATCTACGGAGCGAGGCAGGCGTGCCAGGCGATG
GGGAGCCTGTATCACACCGACTGCTTCATCTGTGACTCCTGTGGGAGACGGCTCCGTGGGAAGGCCTTCT
ATAACGTGGGTGAGAAAGTGTACTGCCAGGAGGACTTCCTGTACTCCGGGTTCCAGCAAACAGCTGACAA
GTGTAGCGTGTGTGGACACCTCATCATGGAGATGATTCTGCAGGCCCTTGGCAAGTCCTACCACCCAGGC
TGCTTCCGCTGCTCAGTGTGCAACGAGTGCTTGGATGGGGTTCCCTTCACTGTGGATGTGGACAACAACA
TTTACTGCGTTAGAGACTATCATACGGTGTTTGCACCAAAATGTGCCTCCTGTGCCCGTCCCATCCTCCC
TGCACAGGGCTGTGAGACAACCATTCGTGTGGTGTCCATGGACAGAGACTACCATGTGGAGTGTTACCAC
TGTGAGGACTGTGGGCTGCAGCTGAGTGGGGAGGAGGGACGCCGCTGCTATCCCCTGGAGGGGCACCTGC
TCTGCCGGCGATGCCACCTGAGGCGCCTTGGGCAGGGCCCGCTCCCCTCGCCTGCTGTGCATGTGACTGA
GCTCTGA

Translation (398 aa):
MQRSRTAADDAALLLAGLGLRESEPTAGSPGRVRRGPRAVDEAAPASGRRGKGGCGGPEAAPDVPSRPER
GPRASLAGSDGGSARSSGISLGYDQRHGPGPGPPSGGSARSSVSSLGSRGSAGACADLLPPGVGPAPARS
PEPAQFPFPLPSLPLPPGREGGPSAAERRLEALTRELERALEARTARDYFGICIKCGLGIYGARQACQAM
GSLYHTDCFICDSCGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIMEMILQALGKSYHPG
CFRCSVCNECLDGVPFTVDVDNNIYCVRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVECYH
CEDCGLQLSGEEGRRCYPLEGHLLCRRCHLRRLGQGPLPSPAVHVTEL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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