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Report for CCDS3541.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3541.1 Public Homo sapiens 4 MUC7 24 110 108 CCDS HistoryNCBI Gene:4589Re-query CCDS DB by CCDS ID:3541.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3541.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304887.6 ENSP00000302021.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000304887.6Link to Ensembl Protein Viewer:ENSP00000302021.5Re-query CCDS DB by Nucleotide ID:ENST00000304887Re-query CCDS DB by Protein ID:ENSP00000302021
Original member Current member EBI ENST00000456088.5 ENSP00000400585.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000456088.5Link to Ensembl Protein Viewer:ENSP00000400585.1Re-query CCDS DB by Nucleotide ID:ENST00000456088Re-query CCDS DB by Protein ID:ENSP00000400585
Original member Current member EBI ENST00000413702.5 ENSP00000407422.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000413702.5Link to Ensembl Protein Viewer:ENSP00000407422.1Re-query CCDS DB by Nucleotide ID:ENST00000413702Re-query CCDS DB by Protein ID:ENSP00000407422
Original member Current member NCBI NM_001145006.2 NP_001138478.1 Accepted alive Link to Nucleotide Sequence:NM_001145006.2Link to Protein Sequence:NP_001138478.1Re-query CCDS DB by Nucleotide ID:NM_001145006Re-query CCDS DB by Protein ID:NP_001138478Link to BLAST:NP_001138478.1
Original member Current member NCBI NM_001145007.2 NP_001138479.1 Accepted alive Link to Nucleotide Sequence:NM_001145007.2Link to Protein Sequence:NP_001138479.1Re-query CCDS DB by Nucleotide ID:NM_001145007Re-query CCDS DB by Protein ID:NP_001138479Link to BLAST:NP_001138479.1
Original member Current member NCBI NM_152291.3 NP_689504.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152291.3Link to Protein Sequence:NP_689504.2Re-query CCDS DB by Nucleotide ID:NM_152291Re-query CCDS DB by Protein ID:NP_689504Link to BLAST:NP_689504.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138478.1 377 Q8TAX7 377 100% 0 0
NP_001138479.1 377 Q8TAX7 377 100% 0 0
NP_689504.2 377 Q8TAX7 377 100% 0 0

Chromosomal Locations for CCDS 3541.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 70474022 70474075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 70480799 70481878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGAAAACTCTGCCGCTGTTTGTGTGCATCTGTGCACTGAGTGCTTGCTTCTCGTTCAGTGAAGGTCGAG
AAAGGGATCATGAACTACGTCACAGAAGGCATCATCACCAATCACCCAAATCTCACTTTGAATTACCACA
TTATCCTGGACTGCTAGCTCACCAGAAGCCGTTCATTAGAAAGTCCTATAAATGTCTGCACAAACGCTGT
AGGCCTAAGCTTCCACCTTCACCTAATAACCCCCCCAAATTCCCAAATCCTCACCAGCCACCTAAACATC
CAGATAAAAATAGCAGTGTGGTCAACCCTACCTTAGTGGCTACAACCCAAATTCCATCTGTGACTTTCCC
ATCAGCTTCCACCAAAATTACTACCCTTCCAAATGTGACTTTTCTTCCCCAGAATGCCACCACCATATCT
TCAAGAGAAAATGTTAACACAAGCTCTTCTGTAGCTACATTAGCACCAGTGAATTCCCCAGCTCCACAAG
ACACCACAGCTGCCCCACCCACACCTTCTGCAACTACACCAGCTCCACCATCTTCCTCAGCTCCACCAGA
GACCACAGCTGCCCCACCCACACCTTCTGCAACTACACAAGCTCCACCATCTTCCTCAGCTCCACCAGAG
ACCACAGCTGCCCCACCCACACCTCCTGCAACTACACCAGCTCCACCATCTTCCTCAGCTCCACCAGAGA
CCACAGCTGCCCCACCCACACCTTCTGCAACTACACCAGCTCCACTATCTTCCTCAGCTCCACCAGAGAC
CACAGCTGTCCCACCCACACCTTCTGCAACTACCCTAGACCCATCATCCGCCTCAGCTCCACCAGAGACC
ACAGCTGCCCCACCCACACCTTCTGCAACTACACCAGCTCCACCGTCTTCCCCAGCTCCACAAGAGACCA
CAGCTGCCCCAATTACCACACCTAATTCTTCCCCAACTACTCTTGCACCTGACACTTCTGAAACTTCAGC
TGCACCCACACACCAGACTACTACTTCGGTCACTACTCAAACTACTACTACTAAACAACCAACTTCAGCT
CCTGGCCAAAATAAAATTTCTCGATTTCTTTTATATATGAAGAATCTACTAAACAGAATTATTGACGACA
TGGTGGAGCAATAG

Translation (377 aa):
MKTLPLFVCICALSACFSFSEGRERDHELRHRRHHHQSPKSHFELPHYPGLLAHQKPFIRKSYKCLHKRC
RPKLPPSPNNPPKFPNPHQPPKHPDKNSSVVNPTLVATTQIPSVTFPSASTKITTLPNVTFLPQNATTIS
SRENVNTSSSVATLAPVNSPAPQDTTAAPPTPSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSAPPE
TTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPET
TAAPPTPSATTPAPPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTSA
PGQNKISRFLLYMKNLLNRIIDDMVEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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