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Report for CCDS28191.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28191.1 Public Mus musculus 16 Cd200r2 23 108 98 CCDS HistoryNCBI Gene:271375Re-query CCDS DB by CCDS ID:28191.1Re-query CCDS DB by GeneID:271375See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 28191.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102805.3 ENSMUSP00000099869.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102805.3Link to Ensembl Protein Viewer:ENSMUSP00000099869.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000102805Re-query CCDS DB by Protein ID:ENSMUSP00000099869
Original member Current member NCBI NM_206535.1 NP_996258.1 Accepted alive Link to Nucleotide Sequence:NM_206535.1Link to Protein Sequence:NP_996258.1Re-query CCDS DB by Nucleotide ID:NM_206535Re-query CCDS DB by Protein ID:NP_996258Link to BLAST:NP_996258.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996258.1 249 Q6XJV6 249 100% 0 0

Chromosomal Locations for CCDS 28191.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 16 (NC_000082.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 44877961 44878024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 44909048 44909362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 44909474 44909722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 44914556 44914670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 44915047 44915053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (750 nt):
ATGCATGCTTTGGGGAGGACTCCGGCTTTGACTTTGCTGATCTTCATCTATAATTTTGTGTCTGTGTACA
CCATAGTGTCTGTACAGATGGGTACAAAGGCTCGGCTCTGCTGCCGTTCTATTCCACTGACAAAAGCAGT
ATTAATCACATGGATAATAAAGCCCAGAGGCCAGCCTTCCTGCATAATGGCCTACAAAGTAGAAACAAAG
GAGACCAATGAAACCTGCTTGGGCAGGAACATCACCTGGGCCTCCACACCTGACCACATTCCTGACCTTC
AGATCAGTGCGGTGGCCCTCCAGCATGAGGGGAATTACTTATGTGAGATAACAACACCTGAAGGGAATTT
CCATAAAGTCTATGACCTCCAAGTGCTGGTGCCCCCTGAAGTAACCTACTTTCTCGGGGAAAATAGAACT
GCAGTTTGTGAGGCAATGGCAGGCAAGCCTGCTGCACAGATCTCTTGGACTCCAGATGGGGACTGTGTCA
CTAAGAGTGAGTCACACAGCAATGGCACTGTGACTGTCAGGAGCACTTGCCACTGGGAGCAGAACAATGT
GTCTGCTGTGTCCTGCATTGTCTCTCATTCGACTGGTAATCAGTCTCTGTCCATAGAACTGAGTAGAGGT
ACCACCAGCACCACCCCTTCCTTGCTGACCATTCTCTACGTGAAAATGGTCCTTTTGGGGATTATTCTTC
TTAAAGTGGGATTTGCTTTCTTCCAGAAGAGAAATGTTACCAGAACATGA

Translation (249 aa):
MHALGRTPALTLLIFIYNFVSVYTIVSVQMGTKARLCCRSIPLTKAVLITWIIKPRGQPSCIMAYKVETK
ETNETCLGRNITWASTPDHIPDLQISAVALQHEGNYLCEITTPEGNFHKVYDLQVLVPPEVTYFLGENRT
AVCEAMAGKPAAQISWTPDGDCVTKSESHSNGTVTVRSTCHWEQNNVSAVSCIVSHSTGNQSLSIELSRG
TTSTTPSLLTILYVKMVLLGIILLKVGFAFFQKRNVTRT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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