NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31585.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31585.1 Public Homo sapiens 11 POLR2G 24 110 108 CCDS HistoryNCBI Gene:5436Re-query CCDS DB by CCDS ID:31585.1Re-query CCDS DB by GeneID:5436See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31585.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301788.12 ENSP00000301788.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301788.12Link to Ensembl Protein Viewer:ENSP00000301788.7Re-query CCDS DB by Nucleotide ID:ENST00000301788Re-query CCDS DB by Protein ID:ENSP00000301788
Original member Current member NCBI NM_002696.3 NP_002687.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002696.3Link to Protein Sequence:NP_002687.1Re-query CCDS DB by Nucleotide ID:NM_002696Re-query CCDS DB by Protein ID:NP_002687Link to BLAST:NP_002687.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002687.1 172 P62487 172 100% 0 0

Chromosomal Locations for CCDS 31585.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 62761649 62761660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62761795 62761904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62762867 62763026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62765182 62765232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62765340 62765405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62765653 62765724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62766243 62766276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 62766494 62766507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGTTCTACCATATCTCCCTAGAGCACGAAATCCTGCTGCACCCGCGCTACTTCGGCCCCAACTTGCTCA
ACACGGTGAAGCAGAAGCTCTTCACCGAGGTGGAGGGGACCTGCACAGGGAAGTATGGCTTTGTAATTGC
TGTCACCACCATTGACAATATTGGTGCTGGTGTGATCCAGCCAGGCCGAGGCTTTGTCCTTTATCCAGTT
AAGTACAAGGCCATTGTTTTCCGGCCATTTAAAGGGGAGGTCGTGGATGCTGTTGTCACTCAGGTCAACA
AGGTTGGACTCTTCACAGAAATTGGGCCCATGTCTTGCTTCATCTCTCGACATTCCATCCCTTCAGAGAT
GGAGTTTGATCCTAACTCCAACCCACCATGTTACAAGACAATGGATGAGGATATTGTGATTCAGCAGGAC
GATGAGATCCGCTTAAAGATTGTGGGGACCCGTGTGGACAAGAATGACATTTTTGCTATTGGCTCCCTGA
TGGACGATTACTTGGGGCTTGTAAGCTGA

Translation (172 aa):
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQPGRGFVLYPV
KYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTMDEDIVIQQD
DEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH