NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS50658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50658.1 Public Mus musculus 2 Ano3 23 108 98 CCDS HistoryNCBI Gene:228432Re-query CCDS DB by CCDS ID:50658.1Re-query CCDS DB by GeneID:228432See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50658.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000099623.9 ENSMUSP00000097219.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000099623.9Link to Ensembl Protein Viewer:ENSMUSP00000097219.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000099623Re-query CCDS DB by Protein ID:ENSMUSP00000097219
Original member Current member NCBI NM_001128103.2 NP_001121575.1 Accepted alive Link to Nucleotide Sequence:NM_001128103.2Link to Protein Sequence:NP_001121575.1Re-query CCDS DB by Nucleotide ID:NM_001128103Re-query CCDS DB by Protein ID:NP_001121575Link to BLAST:NP_001121575.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121575.1 981 A2AHL1-1 981 100% 0 0

Chromosomal Locations for CCDS 50658.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 110658140 110658322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110661167 110661272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110661424 110661504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110665832 110665979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110666375 110666527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110667720 110667853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110671119 110671216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110681815 110681872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110682664 110682775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110688261 110688297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110697026 110697190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110697401 110697541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110697938 110698020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110738771 110738831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110745821 110745917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110756938 110757072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110761443 110761564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110768813 110768868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110770936 110771042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110774991 110775122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110781399 110781443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110783665 110783765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110794913 110795071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110862820 110862938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110880805 110880876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110884851 110885045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 110950058 110950103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2946 nt):
ATGGTCCACCACTCAGGCTCCATTCAGTCCTTTAAACAGCAAAAAGGTATGAATATAAGCAAAAGTGAGA
TAACAACTGAAGCGTCATTAAAACCATCTAGGAGATCCCTGCCTTGCCTGGCCCAGAGCTATGCTCATTC
AAAAAGCTTGAGTCAATCTGCTTCACTGTTTCAGTCAACTGAGAGTGAATCTCAGGCTCCAACTTCTGTA
ACATTTCTTTCTGCTGATAAGCCTGAACATGTTACTTCGGAGGAGAGTAGAAAGGACTCTACCCTTAAGT
GTTCCTTTGCTGACCTCAGTGACTTTTGCTTGGCTCTGGGGAAAGACAAGGATTACCTGGATGAATCTGA
ACATGCCAACTATGATCGATCTCGTCTCCTTAATGACTTTGTTACCAAAGATAAGCCTGCATCCAAGACA
AAGCTGTCTAAGAATGACATGAGTTACATAGCATCTAGTGGACTCTTATTCAAAGATGGCAAAAAGCGAA
TTGATTACATCCTGGTTTATCGAAAAACAAATATACAATATGATAAAAGAAACACATTTGAAAAGAACCT
GAGAGCAGAAGGCTTGATGTTGGAGAAGGAGCCAGCAATTGCCAACCCCGACATCATGTTTATTAAAATT
CACATTCCATGGGACACACTGTGCAAGTATGCAGAGAGGCTGAACATCAGGGTGCCCTTCAGGAAGAAAT
GTTACTATACTGACCAGAAGAACAAATCAAAGAGCAGGGTACAAAACTATTTCAAAAGAATCAAAAAATG
GATGTCCCAAAACCCAATGGTCCTTGACAAGTCAGCGTTTCCAGAGCTGGAGGAGTCGGACTGCTATACT
GGACCCTTCAGCAGAGCTAGGATTCACCACTTCATAATAAACAATAAGGACACCTTCTTCAGCAATGCTA
CTCGAAGCAGGATAGTTTATCACATGCTGGAACGCACCAAATATGAAAATGGAATATCAAAAGTGGGTAT
CCGTAAGCTTATCACTAATGGTTCATACATAGCAGCATTTCCCCCACATGAGGGAGCCTACAAGAGTAGC
CTTCCGATCAAAACCCATGGACCTCAGAATAACAGGCATCTGTTGTATGAGCGCTGGGCACGCTGGGGAA
TGTGGTACAAGCATCAGCCTCTGGACTTAATCAGGATGTACTTTGGTGAGAAGATTGGCTTATACTTCGC
CTGGCTGGGATGGTACACCGGAATGCTGATTCCTGCTGCAGTTGTCGGCCTGTGTGTTTTCTTCTATGGA
TTAGTCACAATGAACGAAAGCCAAGTAAGCCAAGAAATCTGTAAAGCCACTGAAGTCTTCATGTGTCCTC
TATGTGACAAGAATTGCTCACTGCAGAGACTCAACGACAGCTGCATCTATGCCAAGGTAACATATTTGTT
TGATAATGGAGGGACAGTTTTCTTCGCTATTTTTATGGCAATATGGGCCACAGTCTTTCTTGAGTTTTGG
AAAAGGAGAAGAAGCATTCTGACTTACACTTGGGACCTTATTGAATGGGAAGAAGAGGAGGAAACACTTC
GCCCCCAGTTTGAAGCAAAATATTACAGGATGGAGGTAATAAACCCCATCACGGGGAAGCCTGAGCCTCA
TCAGCCTTCATCCGACAAAGTCACGCGACTTCTTGTGTCTGTCTCAGGAATCTTCTTCATGATCTCCTTG
GTCATCACAGCAGTGTTCGCAGTTGTAGTGTACCGTCTGGTAGTCATGGAACAGTTTGCATCATTCAAGT
GGAATTTCGTCAAACAGCACTGGCAGTTTGCTACATCTGGTGCTGCTGTCTGTATCAATTTCATAATCAT
CATGCTGCTGAATCTTGCTTATGAAAAAATTGCATACCTCCTCACTAACTTAGAATATCCTCGAACTGAA
TCAGAATGGGAAAACAGCTTTGCCTTGAAGATGTTCCTTTTCCAGTTTGTCAATTTGAACAGTTCTATCT
TCTATATTGCATTCTTTTTGGGAAGATTCGTAGGCCACCCAGGAAAATACAATAAACTTTTTGAGCGGTG
GAGACTGGAGGAATGCCATCCTAGTGGCTGTCTGATAGACCTCTGCCTCCAGATGGGAGTCATCATGTTT
TTGAAGCAAATATGGAACAACTTCATGGAGCTGGGATATCCGTTAATCCAAAACTGGTGGTCACGACACA
AAATCAAAAGGGGAATACAAGACGCTTCCATACCACAATGGGAAAATGACTGGAACCTTCAGCCTATGAA
CATCCATGGGCTGATGGACGAGTACTTAGAAATGGTTTTGCAATTTGGATTCACTACCATCTTTGTTGCT
GCTTTTCCCCTGGCCCCTCTATTGGCTTTGTTAAACAATATCATAGAAATCAGATTGGATGCATATAAAT
TTGTGACCCAGTGGAGGAGGCCTCTGCCAGCCCGAGCCACTGACATAGGTATCTGGCTTGGAATTCTTGA
GGGAATTGGCATATTGGCTGTGATCACCAATGCATTTGTAATTGCTATTACATCTGATTACATCCCACGT
TTTGTCTATGAATACAAATATGGCCCTTGTGCAAATCATGTGAAGCAGAATGAAAATTGCCTAAAGGGCT
ATGTCAACAATAGCTTATCCTTCTTTGACCTGAGTGAACTTGGTATGGGAAAATCTGGTTACTGCAGGTA
CCGAGACTATAGAGGCCCACCTTGGAGTTCCAAACCCTATGAATTCACCTTACAGTACTGGCACATCCTG
GCTGCTCGATTGGCCTTCATTATCGTGTTTGAGCATCTTGTTTTTGGCATTAAGTCATTCATTGCATACC
TGATTCCTGATATACCAAAGGGCCTCCGTGAGCGCATACGGCGAGAGAAATACTTGGTCCAGGAAATGAT
GTATGAGGCTGAACTGGAACATTTACAACAACAGAGAAGAAAAAGTGGTCAGCCTATTCACCATGAATGG
CCTTAG

Translation (981 aa):
MVHHSGSIQSFKQQKGMNISKSEITTEASLKPSRRSLPCLAQSYAHSKSLSQSASLFQSTESESQAPTSV
TFLSADKPEHVTSEESRKDSTLKCSFADLSDFCLALGKDKDYLDESEHANYDRSRLLNDFVTKDKPASKT
KLSKNDMSYIASSGLLFKDGKKRIDYILVYRKTNIQYDKRNTFEKNLRAEGLMLEKEPAIANPDIMFIKI
HIPWDTLCKYAERLNIRVPFRKKCYYTDQKNKSKSRVQNYFKRIKKWMSQNPMVLDKSAFPELEESDCYT
GPFSRARIHHFIINNKDTFFSNATRSRIVYHMLERTKYENGISKVGIRKLITNGSYIAAFPPHEGAYKSS
LPIKTHGPQNNRHLLYERWARWGMWYKHQPLDLIRMYFGEKIGLYFAWLGWYTGMLIPAAVVGLCVFFYG
LVTMNESQVSQEICKATEVFMCPLCDKNCSLQRLNDSCIYAKVTYLFDNGGTVFFAIFMAIWATVFLEFW
KRRRSILTYTWDLIEWEEEEETLRPQFEAKYYRMEVINPITGKPEPHQPSSDKVTRLLVSVSGIFFMISL
VITAVFAVVVYRLVVMEQFASFKWNFVKQHWQFATSGAAVCINFIIIMLLNLAYEKIAYLLTNLEYPRTE
SEWENSFALKMFLFQFVNLNSSIFYIAFFLGRFVGHPGKYNKLFERWRLEECHPSGCLIDLCLQMGVIMF
LKQIWNNFMELGYPLIQNWWSRHKIKRGIQDASIPQWENDWNLQPMNIHGLMDEYLEMVLQFGFTTIFVA
AFPLAPLLALLNNIIEIRLDAYKFVTQWRRPLPARATDIGIWLGILEGIGILAVITNAFVIAITSDYIPR
FVYEYKYGPCANHVKQNENCLKGYVNNSLSFFDLSELGMGKSGYCRYRDYRGPPWSSKPYEFTLQYWHIL
AARLAFIIVFEHLVFGIKSFIAYLIPDIPKGLRERIRREKYLVQEMMYEAELEHLQQQRRKSGQPIHHEW
P


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH