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Report for CCDS61588.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
61588.1 Public Homo sapiens 15 GPR176 24 110 108 CCDS HistoryNCBI Gene:11245Re-query CCDS DB by CCDS ID:61588.1Re-query CCDS DB by GeneID:11245See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 14, NCBI annotation release 105, Ensembl annotation release 73

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 61588.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543580.7 ENSP00000439361.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543580.7Link to Ensembl Protein Viewer:ENSP00000439361.1Re-query CCDS DB by Nucleotide ID:ENST00000543580Re-query CCDS DB by Protein ID:ENSP00000439361
Original member Current member NCBI NM_001271855.2 NP_001258784.1 Accepted alive Link to Nucleotide Sequence:NM_001271855.2Link to Protein Sequence:NP_001258784.1Re-query CCDS DB by Nucleotide ID:NM_001271855Re-query CCDS DB by Protein ID:NP_001258784Link to BLAST:NP_001258784.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001258784.1 470 Q14439-2 470 100% 0 0

Chromosomal Locations for CCDS 61588.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 39801132 39802254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39807006 39807258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 39829081 39829117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1413 nt):
ATGCCAGCTCCACTGCTTCTTATTTCTAGAACTTTGGGAAACTTCATGGTGTTATGGTCAACTTGCCGCA
CAACCGTGTTCAAATCTGTCACCAACAGGTTCATTAAAAACCTGGCCTGCTCGGGGATTTGTGCCAGCCT
GGTCTGTGTGCCCTTCGACATCATCCTCAGCACCAGTCCTCACTGTTGCTGGTGGATCTACACCATGCTC
TTCTGCAAGGTCGTCAAATTTTTGCACAAAGTATTCTGCTCTGTGACCATCCTCAGCTTCCCTGCTATTG
CTTTGGACAGGTACTACTCAGTCCTCTATCCACTGGAGAGGAAAATATCTGATGCCAAGTCCCGTGAACT
GGTGATGTACATCTGGGCCCATGCAGTGGTGGCCAGTGTCCCTGTGTTTGCAGTAACCAATGTGGCTGAC
ATCTATGCCACGTCCACCTGCACGGAAGTCTGGAGCAACTCCTTGGGCCACCTGGTGTACGTTCTGGTGT
ATAACATCACCACGGTCATTGTGCCTGTGGTGGTGGTGTTCCTCTTCTTGATACTGATCCGACGGGCCCT
GAGTGCCAGCCAGAAGAAGAAGGTCATCATAGCAGCGCTCCGGACCCCACAGAACACCATCTCTATTCCC
TATGCCTCCCAGCGGGAGGCCGAGCTGCACGCCACCCTGCTCTCCATGGTGATGGTCTTCATCTTGTGTA
GCGTGCCCTATGCCACCCTGGTCGTCTACCAGACTGTGCTCAATGTCCCTGACACTTCCGTCTTCTTGCT
GCTCACTGCTGTTTGGCTGCCCAAAGTCTCCCTGCTGGCAAACCCTGTTCTCTTTCTTACTGTGAACAAA
TCTGTCCGCAAGTGCTTGATAGGGACCCTGGTGCAACTACACCACCGGTACAGTCGCCGTAATGTGGTCA
GTACAGGGAGTGGCATGGCTGAGGCCAGCCTGGAACCCAGCATACGCTCGGGTAGCCAGCTCCTGGAGAT
GTTCCACATTGGGCAGCAGCAGATCTTTAAGCCCACAGAGGATGAGGAAGAGAGTGAGGCCAAGTACATT
GGCTCAGCTGACTTCCAGGCCAAGGAGATATTTAGCACCTGCCTGGAGGGAGAGCAGGGGCCACAGTTTG
CGCCCTCTGCCCCACCCCTGAGCACAGTGGACTCTGTATCCCAGGTGGCACCGGCAGCCCCTGTGGAACC
TGAAACATTCCCTGATAAGTATTCCCTGCAGTTTGGCTTTGGGCCTTTTGAGTTGCCTCCTCAGTGGCTC
TCAGAGACCCGAAACAGCAAGAAGCGGCTGCTTCCCCCCTTGGGCAACACCCCAGAAGAGCTGATCCAGA
CAAAGGTGCCCAAGGTAGGCAGGGTGGAGCGGAAGATGAGCAGAAACAATAAAGTGAGCATTTTTCCAAA
GGTGGATTCCTAG

Translation (470 aa):
MPAPLLLISRTLGNFMVLWSTCRTTVFKSVTNRFIKNLACSGICASLVCVPFDIILSTSPHCCWWIYTML
FCKVVKFLHKVFCSVTILSFPAIALDRYYSVLYPLERKISDAKSRELVMYIWAHAVVASVPVFAVTNVAD
IYATSTCTEVWSNSLGHLVYVLVYNITTVIVPVVVVFLFLILIRRALSASQKKKVIIAALRTPQNTISIP
YASQREAELHATLLSMVMVFILCSVPYATLVVYQTVLNVPDTSVFLLLTAVWLPKVSLLANPVLFLTVNK
SVRKCLIGTLVQLHHRYSRRNVVSTGSGMAEASLEPSIRSGSQLLEMFHIGQQQIFKPTEDEEESEAKYI
GSADFQAKEIFSTCLEGEQGPQFAPSAPPLSTVDSVSQVAPAAPVEPETFPDKYSLQFGFGPFELPPQWL
SETRNSKKRLLPPLGNTPEELIQTKVPKVGRVERKMSRNNKVSIFPKVDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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