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Report for CCDS40889.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40889.1 Public Mus musculus X Agtr2 23 108 98 CCDS HistoryNCBI Gene:11609Re-query CCDS DB by CCDS ID:40889.1Re-query CCDS DB by GeneID:11609See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 40889.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000089188.8 ENSMUSP00000086592.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000089188.8Link to Ensembl Protein Viewer:ENSMUSP00000086592.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000089188Re-query CCDS DB by Protein ID:ENSMUSP00000086592
Original member Current member NCBI NM_007429.5 NP_031455.1 Accepted alive Link to Nucleotide Sequence:NM_007429.5Link to Protein Sequence:NP_031455.1Re-query CCDS DB by Nucleotide ID:NM_007429Re-query CCDS DB by Protein ID:NP_031455Link to BLAST:NP_031455.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031455.1 363 P35374 363 100% 0 0

Chromosomal Locations for CCDS 40889.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 21486129 21487220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1092 nt):
ATGAAGGACAACTTCAGTTTTGCTGCCACCAGCAGAAACATTACCAGCAGCCGTCCTTTTGATAATCTCA
ACGCAACTGGCACCAATGAGTCCGCCTTTAATTGCTCACACAAACCATCAGATAAGCATTTGGAAGCAAT
TCCTGTTCTCTACTACATGATTTTTGTGATTGGGTTTGCTGTTAATATTGTTGTGGTCTCACTGTTTTGT
TGTCAAAAGGGCCCTAAAAAGGTGTCCAGCATTTACATCTTCAATCTGGCCTTGGCTGACTTACTCCTTT
TGGCTACCCTCCCTCTCTGGGCAACCTATTACTCTTATAGATATGATTGGCTTTTTGGACCTGTGATGTG
CAAAGTGTTTGGTTCTTTTCTGACTCTGAACATGTTTGCAAGCATTTTTTTTATTACCTGCATGAGTGTC
GATAGGTACCAATCGGTCATCTACCCTTTTCTGTCTCAAAGAAGGAATCCCTGGCAAGCATCTTATGTAG
TTCCCCTTGTTTGGTGTATGGCTTGTCTATCCTCATTGCCAACATTTTATTTCCGGGATGTCAGAACCAT
TGAATACTTAGGTGTGAATGCTTGTATTATGGCTTTCCCACCCGAGAAATATGCTCAGTGGTCTGCTGGG
ATTGCCTTAATGAAAAATATTCTTGGCTTTATTATTCCTTTAATATTCATAGCAACGTGTTACTTTGGAA
TCAGAAAACATCTGCTGAAGACTAATAGCTATGGGAAGAACAGAATTACCCGTGACCAAGTCCTGAAGAT
GGCAGCTGCTGTTGTGTTGGCATTCATCATTTGCTGGCTTCCCTTCCATGTTCTGACCTTCTTGGATGCT
CTGACCTGGATGGGTATCATTAATAGCTGTGAAGTTATAGCAGTCATTGACCTGGCACTTCCTTTTGCCA
TCCTCCTGGGATTCACCAACAGCTGTGTTAATCCCTTCCTGTATTGTTTTGTTGGAAACCGCTTCCAACA
GAAGCTCCGCAGTGTGTTTAGAGTTCCCATTACTTGGCTCCAAGGCAAGAGAGAGACTATGTCTTGCAGA
AAAGGCAGTTCTCTTAGAGAAATGGACACCTTTGTGTCTTAA

Translation (363 aa):
MKDNFSFAATSRNITSSRPFDNLNATGTNESAFNCSHKPSDKHLEAIPVLYYMIFVIGFAVNIVVVSLFC
CQKGPKKVSSIYIFNLALADLLLLATLPLWATYYSYRYDWLFGPVMCKVFGSFLTLNMFASIFFITCMSV
DRYQSVIYPFLSQRRNPWQASYVVPLVWCMACLSSLPTFYFRDVRTIEYLGVNACIMAFPPEKYAQWSAG
IALMKNILGFIIPLIFIATCYFGIRKHLLKTNSYGKNRITRDQVLKMAAAVVLAFIICWLPFHVLTFLDA
LTWMGIINSCEVIAVIDLALPFAILLGFTNSCVNPFLYCFVGNRFQQKLRSVFRVPITWLQGKRETMSCR
KGSSLREMDTFVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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