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Report for CCDS11793.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11793.1 Public Homo sapiens 17 MAFG 24 110 108 CCDS HistoryNCBI Gene:4097Re-query CCDS DB by CCDS ID:11793.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11793.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357736.9 ENSP00000350369.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357736.9Link to Ensembl Protein Viewer:ENSP00000350369.4Re-query CCDS DB by Nucleotide ID:ENST00000357736Re-query CCDS DB by Protein ID:ENSP00000350369
Original member Current member EBI ENST00000392366.7 ENSP00000376173.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392366.7Link to Ensembl Protein Viewer:ENSP00000376173.3Re-query CCDS DB by Nucleotide ID:ENST00000392366Re-query CCDS DB by Protein ID:ENSP00000376173
Original member Current member NCBI NM_002359.4 NP_002350.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002359.4Link to Protein Sequence:NP_002350.1Re-query CCDS DB by Nucleotide ID:NM_002359Re-query CCDS DB by Protein ID:NP_002350Link to BLAST:NP_002350.1
Original member Current member NCBI NM_032711.4 NP_116100.2 Accepted alive Link to Nucleotide Sequence:NM_032711.4Link to Protein Sequence:NP_116100.2Re-query CCDS DB by Nucleotide ID:NM_032711Re-query CCDS DB by Protein ID:NP_116100Link to BLAST:NP_116100.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002350.1 162 O15525 162 100% 0 0
NP_116100.2 162 O15525 162 100% 0 0

Chromosomal Locations for CCDS 11793.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 81922605 81923057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 81923150 81923185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (489 nt):
ATGACGACCCCCAATAAAGGAAACAAGGCCTTGAAGGTGAAGCGGGAGCCGGGTGAGAATGGCACCAGCC
TGACGGATGAGGAGCTGGTGACCATGTCGGTGCGGGAGCTGAACCAGCACCTGCGGGGCCTGTCCAAGGA
GGAGATCGTCCAGCTGAAGCAGCGCCGGCGCACGCTCAAGAACCGCGGCTACGCTGCCAGCTGCCGCGTG
AAGCGGGTGACGCAGAAGGAGGAGCTGGAGAAGCAGAAGGCGGAGCTGCAGCAGGAGGTGGAGAAGCTGG
CCTCAGAGAACGCCAGCATGAAGCTGGAGCTCGACGCGCTGCGCTCCAAGTACGAGGCGCTGCAGACCTT
CGCCCGGACGGTGGCCCGCAGCCCCGTGGCGCCAGCCCGGGGCCCCCTTGCCGCCGGCCTGGGGCCCCTC
GTCCCAGGCAAGGTGGCCGCCACCAGCGTCATCACAATAGTAAAGTCCAAGACGGATGCCCGATCGTAG

Translation (162 aa):
MTTPNKGNKALKVKREPGENGTSLTDEELVTMSVRELNQHLRGLSKEEIVQLKQRRRTLKNRGYAASCRV
KRVTQKEELEKQKAELQQEVEKLASENASMKLELDALRSKYEALQTFARTVARSPVAPARGPLAAGLGPL
VPGKVAATSVITIVKSKTDARS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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