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Report for CCDS35600.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35600.1 Public Mus musculus 1 Crygc 23 108 98 CCDS HistoryNCBI Gene:12966Re-query CCDS DB by CCDS ID:35600.1Re-query CCDS DB by GeneID:12966See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35600.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114064.2 ENSMUSP00000109698.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114064.2Link to Ensembl Protein Viewer:ENSMUSP00000109698.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000114064Re-query CCDS DB by Protein ID:ENSMUSP00000109698
Original member Current member NCBI NM_001082573.2 NP_001076042.1 Accepted alive Link to Nucleotide Sequence:NM_001082573.2Link to Protein Sequence:NP_001076042.1Re-query CCDS DB by Nucleotide ID:NM_001082573Re-query CCDS DB by Protein ID:NP_001076042Link to BLAST:NP_001076042.1

Chromosomal Locations for CCDS 35600.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 65071599 65071874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65073162 65073404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65073497 65073505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGGGGAAGATCACCTTCTTCGAGGACCGCAGCTTCCAGGGCCGCTGCTATGAGTGCAGCAGCGACTGCC
CCAACCTGCAGACCTACTTCAGCCGCTGCAATTCTGTCCGCGTGGACAGTGGCTGCTGGATGCTCTATGA
GCGCCCCAACTACCAGGGCCACCAGTACTTCCTGAGACGTGGAGAGTACCCTGACTACCAGCAGTGGATG
GGTTTCAGCGACTCCATCCGCTCCTGCCGCCTCATCCCCCATCAGGCAGGTTCCCACAGAATGCGGCTGT
ATGAGAAAGAAGATCACAAAGGTGTCATGATGGAGCTGAGCGAGGATTGCTCCTGCATCCAGGATCGCTT
CCACCTCAGTGAGGTGCGCTCGCTGCAAGTGCTGGAAGGCTGCTGGGTTCTCTATGAGATGCCTAACTAC
CGAGGCCGCCAGTATCTGCTGAGGCCTCAAGAGTACCGGCGCTTCCAGGACTGGGGCTCTGTAGATGCTA
AGGCGGGCTCTTTGCGGAGGGTGGTAGATTTATACTAA

Translation (175 aa):
MGKITFFEDRSFQGRCYECSSDCPNLQTYFSRCNSVRVDSGCWMLYERPNYQGHQYFLRRGEYPDYQQWM
GFSDSIRSCRLIPHQAGSHRMRLYEKEDHKGVMMELSEDCSCIQDRFHLSEVRSLQVLEGCWVLYEMPNY
RGRQYLLRPQEYRRFQDWGSVDAKAGSLRRVVDLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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