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Report for CCDS33798.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33798.1 Public Homo sapiens 3 OR5H14 24 110 108 CCDS HistoryNCBI Gene:403273Re-query CCDS DB by CCDS ID:33798.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33798.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000437310.1 ENSP00000401706.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437310.1Link to Ensembl Protein Viewer:ENSP00000401706.1Re-query CCDS DB by Nucleotide ID:ENST00000437310Re-query CCDS DB by Protein ID:ENSP00000401706
Original member Current member EBI ENST00000641380.1 ENSP00000493226.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641380.1Link to Ensembl Protein Viewer:ENSP00000493226.1Re-query CCDS DB by Nucleotide ID:ENST00000641380Re-query CCDS DB by Protein ID:ENSP00000493226
Original member Current member NCBI NM_001005514.2 NP_001005514.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005514.2Link to Protein Sequence:NP_001005514.1Re-query CCDS DB by Nucleotide ID:NM_001005514Re-query CCDS DB by Protein ID:NP_001005514Link to BLAST:NP_001005514.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005514.1 310 A6NHG9 310 100% 0 0

Chromosomal Locations for CCDS 33798.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 98149386 98150318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGAAGAGGAAAATGCAACATTGCTGACAGAGTTTGTTCTCACAGGATTTTTATATCAACCACAGTGGA
AAATACCCCTGTTCCTGGCATTCTTGGTAATATATCTCATCACCATCATGGGGAATCTTGGTCTGATTGC
TGTCATCTGGAAAGACCCTCATCTTCATATCCCAATGTACTTACTCCTTGGGAATTTAGCTTTTGTGGAT
GCTTTGTTATCATCCTCAGTGACTCTGAAGATGCTGATCAACTTCTTAGCTAAGAGTAAGATGATATCTC
TCTCTGAATGCAAGATACAGTTGTTTTCGTTTGCAATCAGTGTAACCACGGAATGTTTTCTCTTGGCAAC
AATGGCATATGATCGCTATGTAGCCATATGCAAACCCTTACTTTATCCAGCCATTATGACCAATGGACTG
TGCATCCGGCTATTAATCTTGTCATATGTAGGTGGTCTTCTTCATGCTTTAATCCATGAAGGATTTTTAT
TCAGACTAACCTTCTGTAACTCCAACATAATACAACACTTTTACTGTGACATTATCCCATTGTTAAAGAT
TTCTTATACTGATTCCTCTATTAACTTTCTAATGGTTTTTATTTTTGCAGGTTCAATTCAAGTTTTTACC
ATAGGGACTGTTCTTATATCTTACATATTTGTCCTCTATACAATCTTGAAAAAGAAGTCTGTCAAAGGTA
TGAGAAAAGCCTTCTCCACCTGTGGAGCTCATCTCTTATCTGTATCTTTATACTATGGGCCCCTCGCCTT
CATGTATATGGGCTCTGCATCCCCACAGGCTGATGACCAAGATATGATGGAGTCTCTATTTTACACTGTC
ATAGTTCCTTTATTAAATCCCATGATCTACAGCCTGAGAAACAAGCAAGTAATAGCTTCATTCACAAAAA
TGTTCAAAAGAAATGATGTTTAG

Translation (310 aa):
MEEENATLLTEFVLTGFLYQPQWKIPLFLAFLVIYLITIMGNLGLIAVIWKDPHLHIPMYLLLGNLAFVD
ALLSSSVTLKMLINFLAKSKMISLSECKIQLFSFAISVTTECFLLATMAYDRYVAICKPLLYPAIMTNGL
CIRLLILSYVGGLLHALIHEGFLFRLTFCNSNIIQHFYCDIIPLLKISYTDSSINFLMVFIFAGSIQVFT
IGTVLISYIFVLYTILKKKSVKGMRKAFSTCGAHLLSVSLYYGPLAFMYMGSASPQADDQDMMESLFYTV
IVPLLNPMIYSLRNKQVIASFTKMFKRNDV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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