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Report for CCDS33804.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33804.1 Public Homo sapiens 3 OR5K2 24 110 108 CCDS HistoryNCBI Gene:402135Re-query CCDS DB by CCDS ID:33804.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33804.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000427338.3 ENSP00000393889.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000427338.3Link to Ensembl Protein Viewer:ENSP00000393889.1Re-query CCDS DB by Nucleotide ID:ENST00000427338Re-query CCDS DB by Protein ID:ENSP00000393889
Original member Current member NCBI NM_001004737.1 NP_001004737.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001004737.1Link to Protein Sequence:NP_001004737.1Re-query CCDS DB by Nucleotide ID:NM_001004737Re-query CCDS DB by Protein ID:NP_001004737Link to BLAST:NP_001004737.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004737.1 316 Q8NHB8 316 100% 0 0

Chromosomal Locations for CCDS 33804.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 98497681 98498631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGTTGAAGAAAATCATACCATGAAAAATGAGTTTATCCTCACAGGATTTACAGATCACCCTGAGCTGA
AGACTCTGCTGTTTGTGGTGTTCTTTGCCATCTATCTGATCACCGTGGTGGGGAATATTAGTTTGGTGGC
ACTGATATTTACACACTGTCGGCTTCACACACCAATGTACATCTTTCTGGGAAATCTGGCTCTTGTGGAT
TCTTGCTGTGCCTGTGCTATTACCCCCAAAATGTTAGAGAACTTCTTTTCTGAGGGCAAAAGGATTTCCC
TCTATGAATGTGCAGTACAGTTTTATTTTCTTTGCACTGTGGAAACTGCAGACTGCTTTCTTCTGGCAGC
AGTGGCCTATGACCGCTATGTGGCCATCTGCAACCCACTGCAGTACCACATCATGATGTCCAAGAAACTC
TGCATTCAGATGACCACAGGCGCCTTCATAGCTGGAAATCTGCATTCCATGATTCATGTAGGGCTTGTAT
TTAGGTTAGTTTTCTGTGGATTGAATCACATCAACCACTTTTACTGTGATACTCTTCCCTTGTATAGACT
CTCCTGTGTTGACCCTTTCATCAATGAACTGGTTCTATTCATCTTCTCAGGTTCAGTTCAAGTCTTTACC
ATAGGTAGTGTCTTAATATCTTATCTCTATATTCTTCTTACTATTTTCAGAATGAAATCCAAGGAGGGAA
GGGCCAAAGCCTTTTCTACTTGTGCATCCCACTTTTCATCAGTTTCATTATTCTATGGATCTATTTTTTT
CCTATACATTAGACCAAATTTGCTTGAAGAAGGAGGTAATGATATACCAGCTGCTATTTTATTTACAATA
GTAGTTCCCTTACTAAATCCTTTCATTTATAGTCTGAGAAACAAGGAAGTAATAAGTGTCTTAAGAAAAA
TTCTGCTGAAAATAAAATCTCAAGGAAGTGTGAACAAATGA

Translation (316 aa):
MVEENHTMKNEFILTGFTDHPELKTLLFVVFFAIYLITVVGNISLVALIFTHCRLHTPMYIFLGNLALVD
SCCACAITPKMLENFFSEGKRISLYECAVQFYFLCTVETADCFLLAAVAYDRYVAICNPLQYHIMMSKKL
CIQMTTGAFIAGNLHSMIHVGLVFRLVFCGLNHINHFYCDTLPLYRLSCVDPFINELVLFIFSGSVQVFT
IGSVLISYLYILLTIFRMKSKEGRAKAFSTCASHFSSVSLFYGSIFFLYIRPNLLEEGGNDIPAAILFTI
VVPLLNPFIYSLRNKEVISVLRKILLKIKSQGSVNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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