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Report for CCDS59413.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59413.1 Public Homo sapiens 19 JOSD2 24 110 108 CCDS HistoryNCBI Gene:126119Re-query CCDS DB by CCDS ID:59413.1Re-query CCDS DB by GeneID:126119See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59413.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000595669.5 ENSP00000468860.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595669.5Link to Ensembl Protein Viewer:ENSP00000468860.1Re-query CCDS DB by Nucleotide ID:ENST00000595669Re-query CCDS DB by Protein ID:ENSP00000468860
Original member Current member NCBI NM_001270641.2 NP_001257570.1 Accepted alive Link to Nucleotide Sequence:NM_001270641.2Link to Protein Sequence:NP_001257570.1Re-query CCDS DB by Nucleotide ID:NM_001270641Re-query CCDS DB by Protein ID:NP_001257570Link to BLAST:NP_001257570.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257570.1 146 Q8TAC2-2 146 100% 0 0

Chromosomal Locations for CCDS 59413.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 50506173 50506272 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50506378 50506572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50510286 50510431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (441 nt):
ATGTCCCAGGCCCCGGGAGCACAGCCGAGCCCACCCACCGTGTACCACGAACGGCAGCGCCTGGAGCTGT
GTGCTGTCCACGCCCTCAACAACGTTCTGCAGCAGCAGCTCTTTAGCCAGGAGGCTGCCGATGAGATCTG
CAAGAGGCCCCTGTCCCAGCTGGCCCTGCCCCAGGTACTGGGGCTGATCCTGAACCTGCCCTCGCCCGTG
TCGCTGGGGCTGCTGTCACTGCCGCTGCGCCGGCGGCACTGGGTGGCCCTGCGCCAGGTGGACGGTGTCT
ACTACAACCTGGACTCCAAGCTGCGGGCGCCCGAGGCCCTGGGGGATGAGGACGGAGTCAGGGCCTTCCT
GGCGGCTGCGCTGGCCCAGGGCCTGTGCGAGGTGCTGCTGGTAGTGACCAAGGAGGTGGAGGAGAAGGGC
AGCTGGCTGCGGACAGACTGA

Translation (146 aa):
MSQAPGAQPSPPTVYHERQRLELCAVHALNNVLQQQLFSQEAADEICKRPLSQLALPQVLGLILNLPSPV
SLGLLSLPLRRRHWVALRQVDGVYYNLDSKLRAPEALGDEDGVRAFLAAALAQGLCEVLLVVTKEVEEKG
SWLRTD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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