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Report for CCDS30903.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30903.2 Public Homo sapiens 1 OR6K3 24 110 108 CCDS HistoryNCBI Gene:391114Re-query CCDS DB by CCDS ID:30903.2See the combined annotation on chromosome 1 in Sequence Viewer

Public Note for CCDS 30903.1
The coding region has been updated to shorten the N-terminus to one that is more supported by other olfactory receptors (ORs), and by the representation in The Human Olfactory Data Explorer (HORDE) database, entry #42-401. This OR gene lacks transcript support, possibly because OR genes are expressed in only a very small fraction of olfactory neurons, and thus, transcript evidence may be difficult to detect for all functional genes.

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 30903.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368145.2 ENSP00000357127.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368145.2Link to Ensembl Protein Viewer:ENSP00000357127.1Re-query CCDS DB by Nucleotide ID:ENST00000368145Re-query CCDS DB by Protein ID:ENSP00000357127
Original member Current member NCBI NM_001005327.3 NP_001005327.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005327.3Link to Protein Sequence:NP_001005327.2Re-query CCDS DB by Nucleotide ID:NM_001005327Re-query CCDS DB by Protein ID:NP_001005327Link to BLAST:NP_001005327.2

Chromosomal Locations for CCDS 30903.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 158717168 158718115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGAGAGCGGAAACCAATCAACAGTGACTGAATTTATCTTCACTGGATTCCCTCAGCTTCAGGATGGTA
GTCTCCTGTACTTCTTTCCTTTACTTTTCATCTATACTTTTATTATCATTGATAACTTATTAATCTTCTC
TGCTGTAAGGCTGGACACCCATCTCCACAACCCCATGTATAATTTTATCAGTATATTTTCCTTTCTGGAG
ATCTGGTACACCACAGCCACCATTCCCAAGATGCTCTCCAACCTCATCAGTGAAAAGAAGGCCATCTCAA
TGACTGGCTGCATCTTGCAGATGTATTTCTTCCACTCACTTGAAAACTCAGAGGGGATCTTGCTGACCAC
CATGGCCATTGACAGATACGTTGCCATCTGCAACCCTCTTCGCTATCAAATGATCATGACCCCCCGGCTC
TGTGCTCAACTCTCTGCAGGTTCCTGCCTCTTCGGTTTCCTTATCCTGCTTCCCGAGATTGTGATGATTT
CCACACTGCCTTTCTGTGGGCCCAACCAAATCCATCAGATCTTCTGTGACTTGGTCCCTGTGCTAAGCCT
GGCCTGTACAGACACGTCCATGATTCTGATTGAGGATGTGATTCATGCTGTGACCATCATCATTACCTTC
CTAATCATTGCCCTGTCCTATGTAAGAATTGTCACTGTGATATTGAGGATTCCCTCTTCTGAAGGGAGGC
AAAAGGCTTTTTCTACCTGTGCAGGCCACCTCATGGTCTTCCCGATATTCTTTGGCAGTGTATCACTCAT
GTACTTGCGTTTCAGCGACACTTATCCACCAGTTTTGGACACAGCCATTGCACTGATGTTTACTGTACTT
GCTCCATTCTTCAATCCCATCATTTATAGCCTGAGAAACAAGGACATGAACAATGCGATTAAAAAACTGT
TCTGTCTTCAAAAAGTGTTGAACAAGCCTGGAGGTTAA

Translation (315 aa):
MESGNQSTVTEFIFTGFPQLQDGSLLYFFPLLFIYTFIIIDNLLIFSAVRLDTHLHNPMYNFISIFSFLE
IWYTTATIPKMLSNLISEKKAISMTGCILQMYFFHSLENSEGILLTTMAIDRYVAICNPLRYQMIMTPRL
CAQLSAGSCLFGFLILLPEIVMISTLPFCGPNQIHQIFCDLVPVLSLACTDTSMILIEDVIHAVTIIITF
LIIALSYVRIVTVILRIPSSEGRQKAFSTCAGHLMVFPIFFGSVSLMYLRFSDTYPPVLDTAIALMFTVL
APFFNPIIYSLRNKDMNNAIKKLFCLQKVLNKPGG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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