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Report for CCDS32358.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32358.1 Public Homo sapiens 16 C1QTNF8 24 110 108 CCDS HistoryNCBI Gene:390664Re-query CCDS DB by CCDS ID:32358.1See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32358.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328449.6 ENSP00000330426.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328449.6Link to Ensembl Protein Viewer:ENSP00000330426.5Re-query CCDS DB by Nucleotide ID:ENST00000328449Re-query CCDS DB by Protein ID:ENSP00000330426
Original member Current member NCBI NM_207419.3 NP_997302.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207419.3Link to Protein Sequence:NP_997302.2Re-query CCDS DB by Nucleotide ID:NM_207419Re-query CCDS DB by Protein ID:NP_997302Link to BLAST:NP_997302.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997302.2 252 P60827 252 100% 0 0

Chromosomal Locations for CCDS 32358.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1093501 1094051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1094715 1094922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (759 nt):
ATGGCAGCCCCCGCCCTGCTGCTCCTAGCACTGCTGCTGCCCGTGGGGGCCTGGCCCGGGCTGCCCAGGA
GGCCCTGTGTGCACTGCTGCCGCCCGGCCTGGCCCCCTGGACCCTATGCCCGGGTGAGTGACAGGGACCT
GTGGAGGGGGGACCTGTGGAGGGGGCTGCCTCGAGTACGGCCCACTATAGACATCGAAATCCTCAAAGGT
GAGAAGGGTGAGGCCGGCGTCCGAGGTCGGGCCGGCAGGAGCGGGAAAGAGGGGCCGCCAGGCGCCCGGG
GCCTGCAGGGCCGCAGAGGCCAGAAGGGGCAGGTGGGGCCGCCGGGCGCCGCGTGCCGACGTGCCTACGC
CGCCTTCTCCGTGGGCCGGCGCGAGGGCCTGCACAGCTCCGACCACTTCCAGGCGGTGCCCTTCGACACG
GAGCTGGTGAACCTGGACGGCGCCTTCGACCTGGCCGCGGGCCGCTTCCTCTGCACGGTGCCCGGCGTCT
ACTTCCTCAGCCTCAACGTGCACACCTGGAACTACAAGGAGACCTACCTGCACATCATGCTGAACCGGCG
GCCCGCGGCCGTGCTCTACGCGCAGCCCAGCGAGCGCAGCGTCATGCAGGCCCAGAGCCTGATGCTGCTG
CTGGCGGCGGGCGACGCCGTCTGGGTGCGCATGTTCCAGCGCGACCGGGACAACGCCATCTACGGCGAGC
ACGGAGACCTCTACATCACCTTCAGCGGCCACCTGGTCAAGCCGGCCGCCGAGCTGTAG

Translation (252 aa):
MAAPALLLLALLLPVGAWPGLPRRPCVHCCRPAWPPGPYARVSDRDLWRGDLWRGLPRVRPTIDIEILKG
EKGEAGVRGRAGRSGKEGPPGARGLQGRRGQKGQVGPPGAACRRAYAAFSVGRREGLHSSDHFQAVPFDT
ELVNLDGAFDLAAGRFLCTVPGVYFLSLNVHTWNYKETYLHIMLNRRPAAVLYAQPSERSVMQAQSLMLL
LAAGDAVWVRMFQRDRDNAIYGEHGDLYITFSGHLVKPAAEL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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