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Report for CCDS31399.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31399.1 Public Homo sapiens 11 OR52N2 24 110 108 CCDS HistoryNCBI Gene:390077Re-query CCDS DB by CCDS ID:31399.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31399.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317037.3 ENSP00000322801.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000317037.3Link to Ensembl Protein Viewer:ENSP00000322801.2Re-query CCDS DB by Nucleotide ID:ENST00000317037Re-query CCDS DB by Protein ID:ENSP00000322801
Original member Current member NCBI NM_001005174.3 NP_001005174.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005174.3Link to Protein Sequence:NP_001005174.1Re-query CCDS DB by Nucleotide ID:NM_001005174Re-query CCDS DB by Protein ID:NP_001005174Link to BLAST:NP_001005174.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005174.1 321 Q8NGI0 321 100% 0 0

Chromosomal Locations for CCDS 31399.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 5820336 5821301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGTCTGGGGACAACAGCTCCAGCCTGACCCCAGGATTCTTTATCTTGAATGGCGTTCCTGGGCTGGAAG
CCACACACATCTGGATCTCCCTGCCATTCTGCTTTATGTACATCATTGCTGTCGTGGGGAACTGTGGGCT
CATCTGCCTCATCAGCCATGAGGAGGCCCTGCACCGGCCCATGTACTACTTCCTGGCCCTGCTCTCCTTC
ACTGATGTCACCTTGTGCACCACCATGGTACCTAATATGCTGTGCATATTCTGGTTCAACCTCAAGGAGA
TTGACTTTAACGCCTGCCTGGCCCAGATGTTTTTTGTCCATATGCTGACAGGGATGGAGTCTGGGGTGCT
CATGCTCATGGCCCTGGACCGCTATGTGGCCATCTGCTACCCCTTACGCTATGCCACCATCCTTACCAAC
CCTGTCATCGCCAAGGCTGGTCTTGCCACCTTCTTGAGGAATGTGATGCTCATCATCCCATTCACTCTCC
TCACCAAGCGCCTGCCCTATTGCCGGGGGAACTTCATCCCCCACACCTACTGTGACCATATGTCTGTGGC
CAAGGTATCCTGTGGCAATTTCAAGGTCAATGCTATTTATGGTCTGATGGTTGCTCTCCTGATTGGTGTG
TTTGATATCTGCTGTATCTCTGTATCTTACACTATGATTTTGCAGGCTGTTATGAGCCTGTCATCAGCAG
ATGCTCGTCACAAAGCCTTCAGCACCTGCACATCTCACATGTGTTCCATTGTGATCACCTATGTTGCTGC
TTTTTTCACTTTTTTCACTCATCGTTTTGTAGGACACAATATCCCAAACCACATACACATCATCGTGGCC
AACCTTTATCTGCTACTGCCTCCTACCATGAACCCAATTGTTTATGGAGTCAAGACCAAGCAGATTCAGG
AAGGTGTAATTAAATTTTTACTTGGAGACAAGGTTAGTTTTACCTATGACAAATGA

Translation (321 aa):
MSGDNSSSLTPGFFILNGVPGLEATHIWISLPFCFMYIIAVVGNCGLICLISHEEALHRPMYYFLALLSF
TDVTLCTTMVPNMLCIFWFNLKEIDFNACLAQMFFVHMLTGMESGVLMLMALDRYVAICYPLRYATILTN
PVIAKAGLATFLRNVMLIIPFTLLTKRLPYCRGNFIPHTYCDHMSVAKVSCGNFKVNAIYGLMVALLIGV
FDICCISVSYTMILQAVMSLSSADARHKAFSTCTSHMCSIVITYVAAFFTFFTHRFVGHNIPNHIHIIVA
NLYLLLPPTMNPIVYGVKTKQIQEGVIKFLLGDKVSFTYDK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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