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Report for CCDS59563.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59563.1 Public Mus musculus 11 Kcnj12 23 108 98 CCDS HistoryNCBI Gene:16515Re-query CCDS DB by CCDS ID:59563.1Re-query CCDS DB by GeneID:16515See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59563.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041944.8 ENSMUSP00000041696.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041944.8Link to Ensembl Protein Viewer:ENSMUSP00000041696.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000041944Re-query CCDS DB by Protein ID:ENSMUSP00000041696
Original member Current member NCBI NM_010603.6 NP_034733.4 Accepted alive Link to Nucleotide Sequence:NM_010603.6Link to Protein Sequence:NP_034733.4Re-query CCDS DB by Nucleotide ID:NM_010603Re-query CCDS DB by Protein ID:NP_034733Link to BLAST:NP_034733.4

Chromosomal Locations for CCDS 59563.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 61066701 61066950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 61069128 61070467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1590 nt):
ATGACCCGCTGGACGTCCCTCAAGGCCTCTAGGCCACACAAGCCTGGCTCCTGGGATCTGGCAGCTTCCC
CCCGGCGTCTGAGTACCCCAACCTTGGCCACCTTCCCCTGGAAGGCTCAGGAACCCGGGGCTGAGATGTC
TTCTCAGAATGCTCCCCGGGTTCCCCAGCCCCGTCAACCCTCTGCCTCCTGGCCTAGACAGAAACAGCAT
CCACCATTACAGCCCCAAGCCTCAGCTAAACAAGCCCATGAAGTGCCCCCGCCTGGAGTCAGCCTGGGGG
CAGGCCAGGGTCCACCAGACCCCGGGATGACCGCAGCCAGTCGGGCCAACCCCTACAGCATCGTATCATC
AGAGGAGGACGGGCTGCACCTGGTTACCATGTCAGGCGCCAACGGTTTTGGCAATGGCAAGGTGCATACA
CGGCGCCGGTGCCGCAACCGCTTCGTCAAGAAGAACGGTCAGTGCAACATTGAATTCGCCAACATGGACG
AGAAGTCACAACGCTACCTGGCTGACATGTTTACCACGTGTGTGGACATCCGCTGGCGCTACATGCTGCT
CATCTTCTCTCTGGCCTTTCTTGCCTCCTGGTTGTTGTTTGGCATCATCTTCTGGGTCATTGCTGTCGCC
CACGGGGACCTGGAGCCAGCCGAGGGCCGTGGCCGTACACCCTGTGTGCTGCAGGTCCACGGCTTCATGG
CAGCCTTTCTCTTCTCCATTGAGACACAGACCACCATTGGCTACGGGCTACGCTGTGTGACTGAAGAGTG
CCCGGTGGCTGTCTTCATGGTGGTGGCGCAGTCCATTGTGGGCTGCATCATTGACTCCTTCATGATTGGT
GCCATCATGGCCAAGATGGCACGGCCCAAGAAGCGCGCACAGACTCTGCTTTTCAGCCATAATGCCGTGG
TGGCTCTGCGTGACGGCAAGCTCTGCCTCATGTGGCGCGTGGGCAACCTGCGTAAGAGTCACATCGTGGA
GGCCCATGTGCGGGCCCAGCTCATCAAGCCCAGGGTCACAGAGGAGGGTGAGTACATCCCACTGGACCAG
ATTGACATCGATGTCGGCTTTGACAAGGGCCTAGACCGTATCTTCCTGGTATCACCCATCACCATCTTGC
ACGAGATTGATGAGGCCAGCCCACTGTTTGGCATTAGCCGTCAGGACCTTGAGACAGACGACTTTGAGAT
TGTGGTCATCCTGGAGGGCATGGTAGAGGCCACAGCCATGACCACACAGGCTCGCAGTTCCTACCTGGCT
AACGAGATCCTGTGGGGCCACCGCTTTGAGCCAGTGCTCTTCGAAGAGAAGAACCAGTACAAGATTGACT
ATTCACACTTCCACAAGACCTACGAGGTGCCATCTACACCCCGCTGCAGCGCCAAGGACCTGGTGGAGAA
CAAGTTCCTCCTGCCCAGCGCCAACTCTTTCTGCTATGAGAACGAGCTGGCCTTCCTGAGCAGAGATGAG
GAGGACGAGGTGGCTACCGACCGGGATGGCCGCAGCCCTCAGCCCGAGCATGACTTTGACAGACTGCAGG
CCAGCAGCGCTGCCCTTGAACGGCCCTACAGACGGGAGTCGGAGATTTGA

Translation (529 aa):
MTRWTSLKASRPHKPGSWDLAASPRRLSTPTLATFPWKAQEPGAEMSSQNAPRVPQPRQPSASWPRQKQH
PPLQPQASAKQAHEVPPPGVSLGAGQGPPDPGMTAASRANPYSIVSSEEDGLHLVTMSGANGFGNGKVHT
RRRCRNRFVKKNGQCNIEFANMDEKSQRYLADMFTTCVDIRWRYMLLIFSLAFLASWLLFGIIFWVIAVA
HGDLEPAEGRGRTPCVLQVHGFMAAFLFSIETQTTIGYGLRCVTEECPVAVFMVVAQSIVGCIIDSFMIG
AIMAKMARPKKRAQTLLFSHNAVVALRDGKLCLMWRVGNLRKSHIVEAHVRAQLIKPRVTEEGEYIPLDQ
IDIDVGFDKGLDRIFLVSPITILHEIDEASPLFGISRQDLETDDFEIVVILEGMVEATAMTTQARSSYLA
NEILWGHRFEPVLFEEKNQYKIDYSHFHKTYEVPSTPRCSAKDLVENKFLLPSANSFCYENELAFLSRDE
EDEVATDRDGRSPQPEHDFDRLQASSAALERPYRRESEI


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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