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Report for CCDS2190.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2190.1 Public Homo sapiens 2 RND3 24 110 108 CCDS HistoryNCBI Gene:390Re-query CCDS DB by CCDS ID:2190.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2190.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263895.9 ENSP00000263895.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263895.9Link to Ensembl Protein Viewer:ENSP00000263895.4Re-query CCDS DB by Nucleotide ID:ENST00000263895Re-query CCDS DB by Protein ID:ENSP00000263895
Original member Current member EBI ENST00000375734.6 ENSP00000364886.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375734.6Link to Ensembl Protein Viewer:ENSP00000364886.2Re-query CCDS DB by Nucleotide ID:ENST00000375734Re-query CCDS DB by Protein ID:ENSP00000364886
Original member Current member NCBI NM_001254738.1 NP_001241667.1 Accepted alive Link to Nucleotide Sequence:NM_001254738.1Link to Protein Sequence:NP_001241667.1Re-query CCDS DB by Nucleotide ID:NM_001254738Re-query CCDS DB by Protein ID:NP_001241667Link to BLAST:NP_001241667.1
Original member Current member NCBI NM_005168.5 NP_005159.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005168.5Link to Protein Sequence:NP_005159.1Re-query CCDS DB by Nucleotide ID:NM_005168Re-query CCDS DB by Protein ID:NP_005159Link to BLAST:NP_005159.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001241667.1 244 P61587 244 100% 0 0
NP_005159.1 244 P61587 244 100% 0 0

Chromosomal Locations for CCDS 2190.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 150469987 150470238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150471627 150471761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150474875 150474984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150486694 150486781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150487268 150487417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (735 nt):
ATGAAGGAGAGAAGAGCCAGCCAGAAATTATCCAGCAAATCTATCATGGATCCTAATCAGAACGTGAAAT
GCAAGATAGTTGTGGTGGGAGACAGTCAGTGTGGAAAAACTGCGCTGCTCCATGTCTTCGCCAAGGACTG
CTTCCCCGAGAATTACGTTCCTACAGTGTTTGAGAATTACACGGCCAGTTTTGAAATCGACACACAAAGA
ATAGAGTTGAGCCTGTGGGACACTTCGGGTTCTCCTTACTATGACAATGTCCGCCCCCTCTCTTACCCTG
ATTCGGATGCTGTGCTGATTTGCTTTGACATCAGTAGACCAGAGACCCTGGACAGTGTCCTCAAAAAGTG
GAAAGGTGAAATCCAGGAATTTTGTCCAAATACCAAAATGCTCTTGGTCGGCTGCAAGTCTGATCTGCGG
ACAGATGTTAGTACATTAGTAGAGCTCTCCAATCACAGGCAGACGCCAGTGTCCTATGACCAGGGGGCAA
ATATGGCCAAACAGATTGGAGCAGCTACTTATATCGAATGCTCAGCTTTACAGTCGGAAAATAGCGTCAG
AGACATTTTTCACGTTGCCACCTTGGCATGTGTAAATAAGACAAATAAAAACGTTAAGCGGAACAAATCA
CAGAGAGCCACAAAGCGGATTTCACACATGCCTAGCAGACCAGAACTCTCGGCAGTTGCTACGGACTTAC
GAAAGGACAAAGCGAAGAGCTGCACTGTGATGTGA

Translation (244 aa):
MKERRASQKLSSKSIMDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQR
IELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLR
TDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKNVKRNKS
QRATKRISHMPSRPELSAVATDLRKDKAKSCTVM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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