NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32468.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32468.2 Public Homo sapiens 16 C16orf86 24 110 108 CCDS HistoryNCBI Gene:388284Re-query CCDS DB by CCDS ID:32468.2See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 32468.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000403458.9 ENSP00000384117.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000403458.9Link to Ensembl Protein Viewer:ENSP00000384117.3Re-query CCDS DB by Nucleotide ID:ENST00000403458Re-query CCDS DB by Protein ID:ENSP00000384117
Original member Current member NCBI NM_001012984.3 NP_001013002.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001012984.3Link to Protein Sequence:NP_001013002.2Re-query CCDS DB by Nucleotide ID:NM_001012984Re-query CCDS DB by Protein ID:NP_001013002Link to BLAST:NP_001013002.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013002.2 317 Q6ZW13 317 100% 0 0

Chromosomal Locations for CCDS 32468.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 67666971 67667072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67667296 67667525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67667878 67668098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 67668200 67668600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (954 nt):
ATGGCCTCGGCAGGGGCGGAGAGGCGGCCGGGGGTCCAGGAGGCGACGGTCGTGGGGCAGGGACAGCTCA
CGGAGGAGCCCGGCAGCGCTCAGACCTCCGAGTGTCCAGTGGCGGGAGACCAGTTCCTGGTGCCTGCCCA
TGAGGCCCGCGGAACCCAGAGTGAAGACCAGCGCCCAGCAGGCGCAGCTTCGGAGTCGGAGCTCCAGGAG
GAAGGACCCAAGCTGGGGGAGGAGCGGCCCAAGCCGCATGCCGGGGCGCTAGAGGAGAGAGGCCCCAGGC
CCGTGGTCTCCATTGTGAGGCCCCGTCATGGTCCAAAGAGAAAGCCTGTCAAGTCTCTCAGCCTCCCGGG
CCTTCGTGCCCATCTTAAGGCTGAAGCTGAGCTGCCACCCAAGCTGCCGCTGCAGGAGGAGGAGCCAGAG
GACAGCCAGAGTGAGCCCTCACCATCTGCCAAACAGCACAAAAAAGCCAAGAAGCGCAAGAGCCTGGGGG
CTCCCGTGCTCCACGCTGTGGCCAGCATGGTGTCTGCACCCTTAGAGACATTGAGGCTGGAGCGAAAGGC
CCAGCGCCTGCGGCCGCTGTACCAGTACGTCAACTATTGCAACCCTGAGCTGAACCAGGCAGGGAAGGGG
GACGGGGAGGCTGAGGTGGAGGCAGAGGCAGAGCTGGCCCCGGTTCCCGAGGAGGGAGGTGTGGAGCAAC
TGCAGGCCTTGCTGCCCTTGGCAGGTGAGCTGGGCCCAGGCCTCGCTTTGCCCTGTCCCAGTCCACTAGT
GACCCCCACCCATGCCCTGGCTCCCCTCGGAGAGGAGGCTGGAGAGGAGCCTGGGGGCTTGCCCAGCTTG
GGGGTGAGTGACCACAAGGCCGAGGTGGATAAGTCAACCCAGGTGGACATCGACAAGATGCTGAGTGTCT
GCACTGCTCCACTTGTCCCCCCGCTCTCTCCTCAGTACAAGTGA

Translation (317 aa):
MASAGAERRPGVQEATVVGQGQLTEEPGSAQTSECPVAGDQFLVPAHEARGTQSEDQRPAGAASESELQE
EGPKLGEERPKPHAGALEERGPRPVVSIVRPRHGPKRKPVKSLSLPGLRAHLKAEAELPPKLPLQEEEPE
DSQSEPSPSAKQHKKAKKRKSLGAPVLHAVASMVSAPLETLRLERKAQRLRPLYQYVNYCNPELNQAGKG
DGEAEVEAEAELAPVPEEGGVEQLQALLPLAGELGPGLALPCPSPLVTPTHALAPLGEEAGEEPGGLPSL
GVSDHKAEVDKSTQVDIDKMLSVCTAPLVPPLSPQYK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH