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Report for CCDS42962.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42962.1 Public Homo sapiens 21 KRTAP10-11 24 110 108 CCDS HistoryNCBI Gene:386678Re-query CCDS DB by CCDS ID:42962.1See the combined annotation on chromosome 21 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42962.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000334670.9 ENSP00000334197.8 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000334670.9Link to Ensembl Protein Viewer:ENSP00000334197.8Re-query CCDS DB by Nucleotide ID:ENST00000334670Re-query CCDS DB by Protein ID:ENSP00000334197
Original member Current member NCBI NM_198692.3 NP_941965.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198692.3Link to Protein Sequence:NP_941965.2Re-query CCDS DB by Nucleotide ID:NM_198692Re-query CCDS DB by Protein ID:NP_941965Link to BLAST:NP_941965.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_941965.2 298 P60412 298 100% 0 0

Chromosomal Locations for CCDS 42962.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 21 (NC_000021.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21See the combined annotation on chromosome 21 in Sequence Viewer

Chromosome Start Stop Links
21 44646459 44647355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 21Link to Ensembl Genome Browser on chromosome 21

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (897 nt):
ATGGCCGCGTCCACCATGTCTGTCTGCTCCAGCGCTTACTCCGACTCCTGGCAGGTGGACGACTGCCCAG
AGAGCTGCTGTGAGCCCCCCTGCAGCGCCCCCAGCTGCTGCGCCCCGGCCCCCTCCCTGAGCCTGGTCTG
CACCCCAGTGAGCTGTGTGTCCAGCCCCTGCTGCCAGGCGGCCTGTGAGCCCAGCGCCTGCCAATCAGGC
TGCACCAGCTCCTGCACGCCGTCATGCTGCCAGCAGTCTAGCTGCCAGCCGGCTTGCTGCACCTCCTCCC
CCTGCCAGCAGGCCTGCTGTGTGCCTGTCTGCTGCAAGACTGTCTGCTGCAAGCCTGTGTGCTGTGTGCC
TGTCTGCTGTGGGGCTGCTTCTTCGTGCTGCCGGCAGTCTAGCTGCCAGCCAGCTTGCTGTGCCTCTTCC
TCCTGCCAGCCGGCCTGCTGTGTGCCCGTCTGCTGCAAGCCTGTGTGCTGTGTGTCCACCTGCTCTGAGG
ATTCCTCTTCATGCTGCCAGCAGTCTAGCTGCCAGCCAGCTTGCTGCACCTCCTCCTCCTACCAGCAGGC
CTGCTGCGTGCCTGTCTGCTGCAAGACTGTCTACTGCAAGCCCATCTGCTGTGTGCCTGTCTGCTCTAGG
GCTTCCTCTTCACGCTGCCAGCAGCCTAGCTGCCAGCCAGCTTGCTGCACCACCTCCTGCTGCAGACCCT
CCTCCTCTGTGTCCCTCCTCTGCCACCCCGTGTGCAGGTCCACCTGCTGTGTGCCCGTCTCCTCCTGCTG
TGCCCCCACCTCCTCCTGCCAGTCCAGCTGCTGCCGCCCGGCCTCCTGCGTGTCCCTCCTCTGCCGCCCC
GCAAGCTCCCGCCTGGCCTGCTACAGCCTCTGCTCAGGCAAGAAGTCCAGCTGCTGA

Translation (298 aa):
MAASTMSVCSSAYSDSWQVDDCPESCCEPPCSAPSCCAPAPSLSLVCTPVSCVSSPCCQAACEPSACQSG
CTSSCTPSCCQQSSCQPACCTSSPCQQACCVPVCCKTVCCKPVCCVPVCCGAASSCCRQSSCQPACCASS
SCQPACCVPVCCKPVCCVSTCSEDSSSCCQQSSCQPACCTSSSYQQACCVPVCCKTVYCKPICCVPVCSR
ASSSRCQQPSCQPACCTTSCCRPSSSVSLLCHPVCRSTCCVPVSSCCAPTSSCQSSCCRPASCVSLLCRP
ASSRLACYSLCSGKKSSC


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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