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Report for CCDS35550.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35550.1 Public Mus musculus 1 Tmem182 23 108 98 CCDS HistoryNCBI Gene:381339Re-query CCDS DB by CCDS ID:35550.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 35550.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000114765.3 ENSMUSP00000110413.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000114765.3Link to Ensembl Protein Viewer:ENSMUSP00000110413.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000114765Re-query CCDS DB by Protein ID:ENSMUSP00000110413
Original member Current member NCBI NM_001081198.1 NP_001074667.1 Accepted alive Link to Nucleotide Sequence:NM_001081198.1Link to Protein Sequence:NP_001074667.1Re-query CCDS DB by Nucleotide ID:NM_001081198Re-query CCDS DB by Protein ID:NP_001074667Link to BLAST:NP_001074667.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074667.1 229 B2RVY9 229 100% 0 0

Chromosomal Locations for CCDS 35550.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 40805756 40805887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40806099 40806198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40807622 40807720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40838298 40838435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 40854796 40855016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGAGACTAAACGTTGCCGTTTTCTTTGGGGCTCTCTTCGGAGCTTTGGGGGTTTTGTTGTTTTTGGTAG
CCTTTGGATCGGATTATTGGCTTCTCGCGACTGAAGTGGGCAGGTGTTCAGGTGAACAGAATATAGAGAA
CATCACTTTTCACCATGAAGGCTTTTTCTGGAGGTGCTGGTTCAGTGGCGTTGTGGAGGAGAACAACTCC
AACATCTGGAAGTTCTGGTACACCAATCAGCCACCATCCAAGAACTGCACACACGCTTACCTGTCCCCGT
ACCCCTTCATGAGGGGAGAGCACAACTCCACCTCCTACGACTCCGCAATTATTTACCGTGGCTTCTGGGC
AGTCCTGCTGCTCCTGGGGGTAGTGGCCGCCTTGACTGCAAGCTTTCTGATCATCTGTGCAGCCCCCTTT
TCCAGTCACTTCCTTTATAAAGCTGGAGGAGGCTCATACATTGCCTCAGGTGTCCTGTTTTCCCTGGTGG
TGATACTGTATGTCATCTGGGTCCAGGCAGTGGCTGACATGGAAAGCTACAGAGCCTTGAGGATGAGAGA
CTGCTGGGAATTCACCCCTTCCATCCTGTACGGCTGGTCGTTTTTTCTGGCCCCCGCTGGCGTATTCTTC
TCTCTGCTCGCTGGGCTGCTCTTTCTAGTTGTTGGACGGCATATCCAGATACATCACTAA

Translation (229 aa):
MRLNVAVFFGALFGALGVLLFLVAFGSDYWLLATEVGRCSGEQNIENITFHHEGFFWRCWFSGVVEENNS
NIWKFWYTNQPPSKNCTHAYLSPYPFMRGEHNSTSYDSAIIYRGFWAVLLLLGVVAALTASFLIICAAPF
SSHFLYKAGGGSYIASGVLFSLVVILYVIWVQAVADMESYRALRMRDCWEFTPSILYGWSFFLAPAGVFF
SLLAGLLFLVVGRHIQIHH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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