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Report for CCDS58381.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58381.1 Public Homo sapiens 15 STOML1 24 110 108 CCDS HistoryNCBI Gene:9399Re-query CCDS DB by CCDS ID:58381.1Re-query CCDS DB by GeneID:9399See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58381.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000561656.5 ENSP00000456853.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000561656.5Link to Ensembl Protein Viewer:ENSP00000456853.1Re-query CCDS DB by Nucleotide ID:ENST00000561656Re-query CCDS DB by Protein ID:ENSP00000456853
Original member Current member NCBI NM_001256676.1 NP_001243605.1 Accepted alive Link to Nucleotide Sequence:NM_001256676.1Link to Protein Sequence:NP_001243605.1Re-query CCDS DB by Nucleotide ID:NM_001256676Re-query CCDS DB by Protein ID:NP_001243605Link to BLAST:NP_001243605.1

Chromosomal Locations for CCDS 58381.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 73983937 73984130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73984659 73984868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73985318 73985513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73988599 73988802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 73989108 73989236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGATTGTGTTCCGCCTGGGCCGGATCCGCACCCCCCAGGGACCTGGCATGGTTCTGCTCTTGCCCTTCA
TTGACTCCTTTCAGAGGGTGGATCTGAGGACACGAGCCTTCAACGTCCCTCCCTGCAAGCTGGCCTCTAA
GGACGGGGCTGTGCTGTCCGTGGGAGCCGATGTCCAGTTTCGCATCTGGGACCCGGTGCTGTCGGTGATG
ACTGTGAAAGACCTGAACACAGCCACACGCATGACAGCCCAGAACGCCATGACCAAGGCCCTGCTCAAGA
GGCCGCTGCGGGAGATCCAGATGGAGAAGCTCAAGATCAGCGACCAGCTTCTGCTGGAGATCAACGATGT
GACCAGGGCCTGGGGGCTGGAGGTAGACCGCGTGGAGCTGGCAGTGGAGGCCGTGCTCCAGCCGCCCCAG
GACAGCCCAGCTGGGCCCAACCTGGACAGCACCCTCCAGCAGCTGGCCCTGCACTTCCTGGGAGGAAGCA
TGAACTCAATGGCAGGAGGTGCCCCGTCCCCGGGGCCAGACACCGTGGAGATGGTGAGTGAAGTTGAGCC
ACCTGCCCCTCAAGTTGGTGCCAGGTCCAGTCCGAAGCAGCCTCTGGCGGAGGGGCTACTGACTGCTCTA
CAGCCCTTCCTGTCTGAGGCCCTGGTCAGCCAAGTCGGGGCCTGCTACCAGTTCAATGTCGTCCTGCCCA
GCGGCACCCAAAGCGCCTACTTCCTGGACCTCACTACAGGACGAGGAAGAGTGGGACACGGGGTGCCTGA
TGGCATCCCTGATGTGGTGGTGGAGATGGCCGAGGCAGACCTGCGGGCCCTGCTATGCAGAGAGCTGCGG
CCCCTGGGGGCCTACATGAGTGGACGGCTGAAGGTGAAGGGCGACCTGGCTATGGCCATGAAGCTGGAGG
CTGTCCTCAGGGCCTTGAAGTAG

Translation (310 aa):
MIVFRLGRIRTPQGPGMVLLLPFIDSFQRVDLRTRAFNVPPCKLASKDGAVLSVGADVQFRIWDPVLSVM
TVKDLNTATRMTAQNAMTKALLKRPLREIQMEKLKISDQLLLEINDVTRAWGLEVDRVELAVEAVLQPPQ
DSPAGPNLDSTLQQLALHFLGGSMNSMAGGAPSPGPDTVEMVSEVEPPAPQVGARSSPKQPLAEGLLTAL
QPFLSEALVSQVGACYQFNVVLPSGTQSAYFLDLTTGRGRVGHGVPDGIPDVVVEMAEADLRALLCRELR
PLGAYMSGRLKVKGDLAMAMKLEAVLRALK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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