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Report for CCDS43984.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43984.1 Public Homo sapiens X SOWAHD 24 110 108 CCDS HistoryNCBI Gene:347454Re-query CCDS DB by CCDS ID:43984.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43984.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343905.5 ENSP00000340975.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343905.5Link to Ensembl Protein Viewer:ENSP00000340975.3Re-query CCDS DB by Nucleotide ID:ENST00000343905Re-query CCDS DB by Protein ID:ENSP00000340975
Original member Current member NCBI NM_001105576.3 NP_001099046.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001105576.3Link to Protein Sequence:NP_001099046.1Re-query CCDS DB by Nucleotide ID:NM_001105576Re-query CCDS DB by Protein ID:NP_001099046Link to BLAST:NP_001099046.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001099046.1 315 A6NJG2 315 100% 0 0

Chromosomal Locations for CCDS 43984.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 119758668 119759615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (948 nt):
ATGGCCCAGCTCGGAGGGGCCGCGAACCGGGCACCCACGGCCTCTCTCGCGCCGACCTCGCAGAGCCTGC
GGTGCGCCCCGCAGCCCCGCCCCTCGAGAGCGGACACTGGTAGCCTGGGCAGGTACTGGGGCAAAGCCGC
AGCCGCCGCCTCCCGGGAGCACCCCTTCCCAGGCACGCTGATGCACTCTGCAGCGGGCTCAGGGCGCCGG
CGGGGAGCGCTGCGGGAACTGCTGGGGCTGCAGCGGGCGGCTCCTGCGGGGTGGCTGTCGGAGGAGCGCG
CCGAGGAGCTGGGCGGGCCGAGTGGGCCGGGCAGCAGCAGGCTGTGCCTGGAACCGCGGGAGCACGCGTG
GATTCTGGCAGCCGCCGAGGGCCGCTATGAGGTGCTGCGGGAGCTGCTGGAGGCTGAGCCGGAGCTGCTG
CTGCGGGGCGACCCGATCACCGGCTACTCGGTTCTGCACTGGCTGGCCAAGCACGGGCGCCACGAGGAGC
TCATTCTGGTACACGATTTCGCCCTACGCCGGGGGCTGAGGCTCGACGTGAGCGCCCCAGGCAGCGGCGG
CCTCACGCCCCTCCACCTGGCGGCCCTTCAGGGCCACGACATGGTCATCAAGGTGCTGGTGGGCGCCCTG
GGTGCTGACGCTACGCGCCGCGACCACAGCGGCCACCGGGCCTGCCACTACCTGCGGCCCGACGCGCCTT
GGAGGTTGCGGGAGCTGTCGGGAGCCGAGGAATGGGAGATGGAGAGCGGCAGCGGGTGCACCAACCTGAA
CAACAACAGCAGTGGCACCACTGCGTGGAGGGCCGCGAGCGCAGTGGGCGCGACGGCTGTGGAGACAAGC
AGGAGAGTGGCAGCGTCGCGGACCAAGGCGAAGGACACCGCGGGCAGCCGGGTGGCGCAAATGCATAGCC
TTTTCCGCCATCTGTTCCCCTCATTCCAGGACCGTTGA

Translation (315 aa):
MAQLGGAANRAPTASLAPTSQSLRCAPQPRPSRADTGSLGRYWGKAAAAASREHPFPGTLMHSAAGSGRR
RGALRELLGLQRAAPAGWLSEERAEELGGPSGPGSSRLCLEPREHAWILAAAEGRYEVLRELLEAEPELL
LRGDPITGYSVLHWLAKHGRHEELILVHDFALRRGLRLDVSAPGSGGLTPLHLAALQGHDMVIKVLVGAL
GADATRRDHSGHRACHYLRPDAPWRLRELSGAEEWEMESGSGCTNLNNNSSGTTAWRAASAVGATAVETS
RRVAASRTKAKDTAGSRVAQMHSLFRHLFPSFQDR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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