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Report for CCDS35355.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35355.1 Public Homo sapiens X BEX4 24 110 108 CCDS HistoryNCBI Gene:56271Re-query CCDS DB by CCDS ID:35355.1Re-query CCDS DB by GeneID:56271See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35355.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372691.3 ENSP00000361776.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372691.3Link to Ensembl Protein Viewer:ENSP00000361776.3Re-query CCDS DB by Nucleotide ID:ENST00000372691Re-query CCDS DB by Protein ID:ENSP00000361776
Original member Current member EBI ENST00000372695.6 ENSP00000361780.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372695.6Link to Ensembl Protein Viewer:ENSP00000361780.5Re-query CCDS DB by Nucleotide ID:ENST00000372695Re-query CCDS DB by Protein ID:ENSP00000361780
Original member Current member NCBI NM_001080425.4 NP_001073894.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080425.4Link to Protein Sequence:NP_001073894.1Re-query CCDS DB by Nucleotide ID:NM_001080425Re-query CCDS DB by Protein ID:NP_001073894Link to BLAST:NP_001073894.1
Original member Current member NCBI NM_001127688.2 NP_001121160.1 Accepted alive Link to Nucleotide Sequence:NM_001127688.2Link to Protein Sequence:NP_001121160.1Re-query CCDS DB by Nucleotide ID:NM_001127688Re-query CCDS DB by Protein ID:NP_001121160Link to BLAST:NP_001121160.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073894.1 120 Q9NWD9 120 100% 0 0
NP_001121160.1 120 Q9NWD9 120 100% 0 0

Chromosomal Locations for CCDS 35355.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 103216154 103216516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (363 nt):
ATGGAGTCCAAAGAGGAACTAGCGGCAAACAATCTCAACGGGGAAAATGCCCAACAAGAAAACGAAGGAG
GGGAGCAGGCCCCCACGCAGAATGAAGAAGAATCCCGCCATTTGGGAGGGGGTGAAGGCCAGAAGCCTGG
AGGAAATATCAGGCGGGGGCGAGTTAGGCGACTTGTCCCTAATTTTCGATGGGCCATACCTAATAGGCAT
ATTGAGCACAATGAAGCGAGAGATGATGTAGAAAGGTTTGTAGGGCAGATGATGGAAATCAAGAGAAAGA
CTAGGGAACAGCAGATGAGGCACTATATGCGCTTCCAAACTCCTGAACCTGACAACCATTATGACTTTTG
CCTCATACCTTGA

Translation (120 aa):
MESKEELAANNLNGENAQQENEGGEQAPTQNEEESRHLGGGEGQKPGGNIRRGRVRRLVPNFRWAIPNRH
IEHNEARDDVERFVGQMMEIKRKTREQQMRHYMRFQTPEPDNHYDFCLIP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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