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Report for CCDS31095.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31095.1 Public Homo sapiens 1 OR6F1 24 110 108 CCDS HistoryNCBI Gene:343169Re-query CCDS DB by CCDS ID:31095.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31095.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000641444.1 ENSP00000493324.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000641444.1Link to Ensembl Protein Viewer:ENSP00000493324.1Re-query CCDS DB by Nucleotide ID:ENST00000641444Re-query CCDS DB by Protein ID:ENSP00000493324
Original member Current member EBI ENST00000641470.1 ENSP00000493342.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000641470.1Link to Ensembl Protein Viewer:ENSP00000493342.1Re-query CCDS DB by Nucleotide ID:ENST00000641470Re-query CCDS DB by Protein ID:ENSP00000493342
Original member Current member NCBI NM_001005286.2 NP_001005286.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005286.2Link to Protein Sequence:NP_001005286.1Re-query CCDS DB by Nucleotide ID:NM_001005286Re-query CCDS DB by Protein ID:NP_001005286Link to BLAST:NP_001005286.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005286.1 308 Q8NGZ6 308 100% 0 0

Chromosomal Locations for CCDS 31095.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247711829 247712755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGACACAGGCAACAAAACTCTGCCCCAGGACTTTCTCTTACTGGGCTTTCCTGGTTCTCAAACTCTTC
AGCTCTCTCTCTTTATGCTTTTTCTGGTGATGTACATCCTCACAGTTAGTGGTAATGTGGCTATCTTGAT
GTTGGTGAGCACCTCCCATCAGTTGCATACCCCCATGTACTTCTTTCTGAGCAACCTCTCCTTCCTGGAG
ATTTGGTATACCACAGCAGCAGTGCCCAAAGCACTGGCCATCCTACTGGGGAGAAGTCAGACCATATCAT
TTACAAGCTGTCTTTTGCAGATGTACTTTGTTTTCTCATTAGGCTGCACAGAGTACTTCCTCCTGGCAGC
CATGGCTTATGACCGCTGTCTTGCCATCTGCTATCCTTTACACTACGGAGCCATCATGAGTAGCCTGCTC
TCAGCGCAGCTGGCCCTGGGCTCCTGGGTGTGTGGTTTCGTGGCCATTGCAGTGCCCACAGCCCTCATCA
GTGGCCTGTCCTTCTGTGGCCCCCGTGCCATCAACCACTTCTTCTGTGACATTGCACCCTGGATTGCCCT
GGCCTGCACCAACACACAGGCAGTAGAGCTTGTGGCCTTTGTGATTGCTGTTGTGGTTATCCTGAGTTCA
TGCCTCATCACCTTTGTCTCCTATGTGTACATCATCAGCACCATCCTCAGGATCCCCTCTGCCAGTGGCC
GGAGCAAAGCCTTCTCCACGTGCTCCTCGCATCTCACCGTGGTGCTCATTTGGTATGGGTCCACAGTTTT
CCTTCACGTCCGCACCTCTATCAAAGATGCCTTGGATCTGATCAAAGCTGTCCACGTCCTGAACACTGTG
GTGACTCCAGTTTTAAACCCCTTCATCTATACGCTTCGTAATAAGGAAGTAAGAGAGACTCTGCTGAAGA
AATGGAAGGGAAAATAA

Translation (308 aa):
MDTGNKTLPQDFLLLGFPGSQTLQLSLFMLFLVMYILTVSGNVAILMLVSTSHQLHTPMYFFLSNLSFLE
IWYTTAAVPKALAILLGRSQTISFTSCLLQMYFVFSLGCTEYFLLAAMAYDRCLAICYPLHYGAIMSSLL
SAQLALGSWVCGFVAIAVPTALISGLSFCGPRAINHFFCDIAPWIALACTNTQAVELVAFVIAVVVILSS
CLITFVSYVYIISTILRIPSASGRSKAFSTCSSHLTVVLIWYGSTVFLHVRTSIKDALDLIKAVHVLNTV
VTPVLNPFIYTLRNKEVRETLLKKWKGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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