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Report for CCDS92615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92615.1 Public Homo sapiens 19 LEUTX 24 110 108 CCDS HistoryNCBI Gene:342900Re-query CCDS DB by CCDS ID:92615.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92615.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000638280.2 ENSP00000491740.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000638280.2Link to Ensembl Protein Viewer:ENSP00000491740.1Re-query CCDS DB by Nucleotide ID:ENST00000638280Re-query CCDS DB by Protein ID:ENSP00000491740
Original member Current member NCBI NM_001382345.1 NP_001369274.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001382345.1Link to Protein Sequence:NP_001369274.1Re-query CCDS DB by Nucleotide ID:NM_001382345Re-query CCDS DB by Protein ID:NP_001369274Link to BLAST:NP_001369274.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001369274.1 198 A8MZ59-2 198 100% 0 0

Chromosomal Locations for CCDS 92615.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 39778921 39778927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39784527 39784678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 39785698 39786135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (597 nt):
ATGTTTGAAGGGCCAAGGCGTTATCGTCGGCCACGCACAAGATTTCTCTCCAAACAACTCACAGCATTGA
GAGAATTGCTTGAAAAGACCATGCACCCAAGTTTGGCTACAATGGGGAAACTGGCTTCAAAGCTACAACT
TGATCTATCCGTAGTAAAGATCTGGTTCAAGAACCAGCGTGCCAAATGGAAGAGGCAGCAGCGGCAGCAA
ATGCAGACACGGCCATCACTAGGGCCAGCAAACCAGACAACTTCAGTGAAGAAGGAGGAGACTCCCTCAG
CCATAACTACTGCAAACATTCGTCCAGTAAGTCCTGGAATCTCTGATGCAAATGACCATGATCTACGTGA
GCCTTCTGGTATCAAGAATCCTGGAGGAGCCAGCGCCTCTGCGAGGGTTTCATCCTGGGATTCTCAGTCA
TATGACATTGAACAGATATGTCTGGGGGCTTCAAATCCTCCTTGGGCCTCCACTCTCTTTGAAATAGATG
AATTTGTAAAGATCTATGACTTGCCAGGGGAAGATGACACCAGCAGCCTAAATCAATATCTTTTTCCAGT
ATGCCTTGAGTATGACCAGCTCCAATCTTCAGTGTAA

Translation (198 aa):
MFEGPRRYRRPRTRFLSKQLTALRELLEKTMHPSLATMGKLASKLQLDLSVVKIWFKNQRAKWKRQQRQQ
MQTRPSLGPANQTTSVKKEETPSAITTANIRPVSPGISDANDHDLREPSGIKNPGGASASARVSSWDSQS
YDIEQICLGASNPPWASTLFEIDEFVKIYDLPGEDDTSSLNQYLFPVCLEYDQLQSSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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