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Report for CCDS33047.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33047.1 Public Homo sapiens 19 ZNF233 24 110 108 CCDS HistoryNCBI Gene:353355Re-query CCDS DB by CCDS ID:33047.1Re-query CCDS DB by GeneID:353355See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33047.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000391958.6 ENSP00000375820.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391958.6Link to Ensembl Protein Viewer:ENSP00000375820.1Re-query CCDS DB by Nucleotide ID:ENST00000391958Re-query CCDS DB by Protein ID:ENSP00000375820
Original member Current member EBI ENST00000683810.1 ENSP00000507588.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000683810.1Link to Ensembl Protein Viewer:ENSP00000507588.1Re-query CCDS DB by Nucleotide ID:ENST00000683810Re-query CCDS DB by Protein ID:ENSP00000507588
Original member Current member NCBI NM_001207005.2 NP_001193934.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001207005.2Link to Protein Sequence:NP_001193934.1Re-query CCDS DB by Nucleotide ID:NM_001207005Re-query CCDS DB by Protein ID:NP_001193934Link to BLAST:NP_001193934.1
Original member Current member NCBI NM_181756.3 NP_861421.2 Accepted alive Link to Nucleotide Sequence:NM_181756.3Link to Protein Sequence:NP_861421.2Re-query CCDS DB by Nucleotide ID:NM_181756Re-query CCDS DB by Protein ID:NP_861421Link to BLAST:NP_861421.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001193934.1 670 A6NK53 670 100% 0 0
NP_861421.2 670 A6NK53 670 100% 0 0

Chromosomal Locations for CCDS 33047.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44264361 44264375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44266198 44266324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44266866 44266961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44272899 44274673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2013 nt):
ATGACCAAGTTTCAGGAGATGGTGACATTCAAGGATGTGGCTGTGGTCTTCACCAGGGAGGAGCTGGGGT
TGCTGGACCTTGCCCAGAGAAAGCTGTACCAAGATGTGATGCTGGAGAACTTCAGGAACCTGCTGTCAGT
GGGCTATCAACCCTTCAAACTAGATGTGATATTACAGTTGGGAAAAGAAGACAAGCTTCGGATGATGGAG
ACAGAAATCCAAGGAGATGGGTGTTCAGGACACAAGAATCAAAATGAGATAGATACCCTTCAAGAAGTAA
GATTAAGATTCCTTTCATATGAAGACCTTATATGCTGGCAAATATGGGAACAATTTACAAGTAAATTAAC
CAGTAATCAAGACCTAATAATAAATCTTCAAGGCAAGAGGTCCAAGTTGCTAAAACAAGGTGATTCCCCC
TGTCAGGTGTGGACAGGAGAATCTAGTCAGGTCTCTGAAGATGAGAACTATGTAATAAAGCTACAAGGGG
AGAGTTCAAATAGCATAAAAAATCAAGAGCTTCCATTGAGGACCACCTGGGATTTCTGGAGGAAAATGTA
TCTGAGAGAACCACAGAATTATCAGAGTAGGTGTCAGCAAATTGATGTAAAAAATAAGCTCTGTAAATGT
GATCATTGTGTTAGGCAAAGAATTGCTCATCAACATGATGATCATGGAGTACACAAAAGAGAGAAAGCTT
TTAGCCACAATAATTGTGGAAAAGACTGTGTGAAGGAATCATCCCAGCATAGCATAATCCAATCAGGAGA
GCAAACCTCTGATGAAAATGGAAAAGGCTTAAGTGTTGGCTCTAATCTTGAACTTCACCAGCAACTACAC
TTAAGAGACAAGCCTCATGTAAATGTTGAGTACGGGAAGGGCATAGGTTACAGCTCAGGGCTTCCCAGGC
ATCAGTGTTTCCACATAGGAGAGAAATGCTATAGGAATGGTGACAGTGGTGAGGGCTTCAGTCAGGGCTC
ACATCTGCAACCTCATCAGAGAGTCAGCACAGGAGAGAACCTCTACAGATGTCAGGTATATGCCCGGAGC
TCCAACCAGAACTCCTGTCTTCCCTCTCATGAGCTTACTCACCCAGGAGAGAAGTTGTGTACATGTGGCA
GGTGTGGGAAGGGCTTCCATCATAGCTTAGATTTTGACATTCACTGTGTAGACAGTGCTGGAGAGAGAGC
CTGTAAATGTGATGTATATGATAAAGGCTTCAGTCAGACATCACAACTTCAAGCCCATCAGAGAGGTCAC
TCTAGAGACAAGACATACAAATGGGAAGTAAGTGACAGGATATTTAATAGGAATTCTGGTCTTCACCAGA
GAGTTCACACTGGAGAGAAACCATATAAATGTGAGGTATGTGATAAGGGCTTCAGTAAGGCCTCAAATCT
TCAAGCCCATCAGAGAATCCACACTGGAGAGAAACCCTACAAATGTGATGTGTGTGATAAGAACTTCAGC
CGTAATTCCCACCTTCAGGCCCATCAGAGAGTCCATACAGGAGAGAAACCCTACAAATGTGACACATGTG
GGAAGGACTTCAGTCAGATCTCTCATCTTCAGGCCCATCAGAGAGTTCACAAAGGAGAGAAGCCATACAA
ATGTGAGACATGTGGGAAGGGCTTTAGTCAGAGTTCGCATCTCCAAGACCATCAGCAAGTCCATACTGGA
GAGAATCCCTACAAATGTGATGTGTGTGGGAAAGGCTTCAGTTGGAGTTCACATCTTCAAGCCCATCAGA
GAGTCCACACAGGAGAGAAACCATACAAATGTGAAGAATGTAGGAAAGGCTTCATCTGGAACTCATATCT
TCATGTTCATCAGAGGATCCACACGGGAGAGAAACCCTATAAATGTGGCATGTGTGGTAAGAGCTTCAGT
CAGACTTCACATCTTCAAGCCCATCAGAGAGTCCATACTGGAGAGAAACCATACAAATGTTTTGTGTGTG
GTAAGGGCTTTAGTAAGAGTTCGTTGTCTTCAGATTCATCAGAGAGTCCATGA

Translation (670 aa):
MTKFQEMVTFKDVAVVFTREELGLLDLAQRKLYQDVMLENFRNLLSVGYQPFKLDVILQLGKEDKLRMME
TEIQGDGCSGHKNQNEIDTLQEVRLRFLSYEDLICWQIWEQFTSKLTSNQDLIINLQGKRSKLLKQGDSP
CQVWTGESSQVSEDENYVIKLQGESSNSIKNQELPLRTTWDFWRKMYLREPQNYQSRCQQIDVKNKLCKC
DHCVRQRIAHQHDDHGVHKREKAFSHNNCGKDCVKESSQHSIIQSGEQTSDENGKGLSVGSNLELHQQLH
LRDKPHVNVEYGKGIGYSSGLPRHQCFHIGEKCYRNGDSGEGFSQGSHLQPHQRVSTGENLYRCQVYARS
SNQNSCLPSHELTHPGEKLCTCGRCGKGFHHSLDFDIHCVDSAGERACKCDVYDKGFSQTSQLQAHQRGH
SRDKTYKWEVSDRIFNRNSGLHQRVHTGEKPYKCEVCDKGFSKASNLQAHQRIHTGEKPYKCDVCDKNFS
RNSHLQAHQRVHTGEKPYKCDTCGKDFSQISHLQAHQRVHKGEKPYKCETCGKGFSQSSHLQDHQQVHTG
ENPYKCDVCGKGFSWSSHLQAHQRVHTGEKPYKCEECRKGFIWNSYLHVHQRIHTGEKPYKCGMCGKSFS
QTSHLQAHQRVHTGEKPYKCFVCGKGFSKSSLSSDSSESP


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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