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Report for CCDS40726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40726.1 Public Mus musculus 9 Slc9a9 23 108 98 CCDS HistoryNCBI Gene:331004Re-query CCDS DB by CCDS ID:40726.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40726.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033463.9 ENSMUSP00000033463.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033463.9Link to Ensembl Protein Viewer:ENSMUSP00000033463.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000033463Re-query CCDS DB by Protein ID:ENSMUSP00000033463
Original member Current member NCBI NM_177909.5 NP_808577.3 Accepted alive Link to Nucleotide Sequence:NM_177909.5Link to Protein Sequence:NP_808577.3Re-query CCDS DB by Nucleotide ID:NM_177909Re-query CCDS DB by Protein ID:NP_808577Link to BLAST:NP_808577.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808577.3 644 Q8BZ00 644 100% 0 0

Chromosomal Locations for CCDS 40726.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 94670062 94670236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94685055 94685257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94711344 94711421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94712895 94712971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94809927 94810042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94855691 94855796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94936310 94936448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94939456 94939561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 94960398 94960486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 95019105 95019218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 95020601 95020712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 95055412 95055565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 95123011 95123062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 95137901 95137980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 95227188 95227293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 95228838 95229065 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1935 nt):
ATGGCTGGGCAGCTTCGGTTTACGTCAGGGAAGGATGAAGATCATTTTCAACACCAGGGAGCAGTGGAGC
TACTCGCGTTTAATTTTTTGCTCATCCTTACCATTTTAACAATCTGGTTATTTAAAAATCACCGATTCCG
CTTCTTGCATGAGACTGGAGGGGCGATGGTGTATGGCCTCATAATGGGACTAATTTTGCGATATGCCACA
GCGCCGACTGATATTGATAGTGGAACTGTCTACAACTGTGGGAACTTGTTCTTCAGCCCATCAACTCTAC
TAGTCAACATCACCGACCAAGTTTATGAGTATAAGTACCAGAGAGAGATCAACCAGCACAATATCAGCCC
CCACCAAGGCAACGCCATACTGGAGAAGATGACGTTTGACCCAGAAATCTTCTTCAACGTTTTGCTGCCT
CCCATCATATTTCATGCAGGATACAGTCTGAAGAAGAGACACTTTTTTCAAAACTTGGGATCCATTTTAA
CATATGCCTTCTTGGGAACAGCCATCTCCTGTGTGGTCATAGGGTTAATTATGTACGGCTTTGTGAAAGC
CATGGTGCATGCTGGCCAGCTGAAGAGCGGAGACTTCCACTTCACTGACTGTTTATTTTTTGGTTCACTG
ATGTCTGCTACAGATCCAGTGACAGTGCTGGCCATTTTCCATGAACTCCACGTGGACCCAGACCTGTACA
CACTGCTGTTTGGAGAGAGTGTACTGAATGATGCGGTGGCCATAGTCCTCACATACTCTATATCCATCTA
TAGTCCCAAGGAGAATCCCAACGCGTTTGACACGGCAGCGTTCTTCCAATCCGTGGGCAATTTCCTAGGG
ATCTTTGCCGGCTCCTTTGCAATGGGCTCCGCATATGCAGTTGTTACCGCACTGTTGACCAAATTTACCA
AGCTCCGTGAGTTCCCGATGCTGGAGACAGGCCTGTTTTTCCTCCTTTCTTGGAGTGCCTTCCTGTCTGC
AGAGGCCGCCGGCTTAACAGGCATAGTTGCTGTTCTCTTCTGTGGAGTCACACAGGCACATTACACCTAC
AACAATCTGTCATCGGATTCCAAACTGAGGACCAAACAGCTGTTTGAATTTATGAACTTCCTGGCTGAAA
ACGTCATCTTCTGCTACATGGGCCTGGCTCTGTTCACCTTCCAGAATCACATTTTCAATGCTCTTTTTAT
ACTCGGAGCCTTTCTAGCAATTTTTGTTGCCAGAGCCTGCAACATTTACCCCCTCTCCTTCCTCCTGAAT
CTGGGCAGAAAGCAGAAGATTCCCTGGAACTTCCAGCACATGATGATGTTTTCAGGTTTGCGAGGTGCCA
TTGCCTTCGCCCTGGCCATCCGCAACACGGAATCTCAGCCCAAACAGATGATGTTCACCACCACACTGCT
CCTTGTGTTCTTCACTGTCTGGGTGTTTGGAGGAGGAACGACCCCCATGCTGACGTGGCTTCAGATCAGA
GTTGGTGTGGACCTGGATGAAAGTCTGAAGGAAGAGCCCTCCTCACAGCAGGAAGCAAATAAGTTGGACA
AAAACATGACGAAGACAGAGAGTGCACAGCTCTTCAGAATGTGGTATGGATTTGACCACAAATACCTGAA
ACCCATCCTAACACACTCAGGCCCTCCACTGACCACCACCTTGCCAGCGTGGTGTGGCCCAGTCTCCAGG
CTGCTCACCAGTCCGCAGGCCTATGGGGAACAACTGAAAGAGGATGACGTGGAATGTATCGTCAACCAAG
ATGAACTGGCCATGAATTACCAGGAGCAGAGCCCTTCACCCAGCAGTCCCACCACCAAGCTAGCTCTGGA
CCAGAAGTCTTCAGGCCAGACTCCAGGCAAGGAGAATATCTACGAGGGAGATCTCGGCCTGGGAGGCTAT
GATCTCAAACTGGAGCAGACTCGGGGTCAACCCCAGATGGACTAA

Translation (644 aa):
MAGQLRFTSGKDEDHFQHQGAVELLAFNFLLILTILTIWLFKNHRFRFLHETGGAMVYGLIMGLILRYAT
APTDIDSGTVYNCGNLFFSPSTLLVNITDQVYEYKYQREINQHNISPHQGNAILEKMTFDPEIFFNVLLP
PIIFHAGYSLKKRHFFQNLGSILTYAFLGTAISCVVIGLIMYGFVKAMVHAGQLKSGDFHFTDCLFFGSL
MSATDPVTVLAIFHELHVDPDLYTLLFGESVLNDAVAIVLTYSISIYSPKENPNAFDTAAFFQSVGNFLG
IFAGSFAMGSAYAVVTALLTKFTKLREFPMLETGLFFLLSWSAFLSAEAAGLTGIVAVLFCGVTQAHYTY
NNLSSDSKLRTKQLFEFMNFLAENVIFCYMGLALFTFQNHIFNALFILGAFLAIFVARACNIYPLSFLLN
LGRKQKIPWNFQHMMMFSGLRGAIAFALAIRNTESQPKQMMFTTTLLLVFFTVWVFGGGTTPMLTWLQIR
VGVDLDESLKEEPSSQQEANKLDKNMTKTESAQLFRMWYGFDHKYLKPILTHSGPPLTTTLPAWCGPVSR
LLTSPQAYGEQLKEDDVECIVNQDELAMNYQEQSPSPSSPTTKLALDQKSSGQTPGKENIYEGDLGLGGY
DLKLEQTRGQPQMD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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