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Report for CCDS22024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22024.1 Public Mus musculus 7 Dusp8 23 108 98 CCDS HistoryNCBI Gene:18218Re-query CCDS DB by CCDS ID:22024.1Re-query CCDS DB by GeneID:18218See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22024.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000039926.9 ENSMUSP00000049414.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000039926.9Link to Ensembl Protein Viewer:ENSMUSP00000049414.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000039926Re-query CCDS DB by Protein ID:ENSMUSP00000049414
Original member Current member NCBI NM_008748.3 NP_032774.1 Accepted alive Link to Nucleotide Sequence:NM_008748.3Link to Protein Sequence:NP_032774.1Re-query CCDS DB by Nucleotide ID:NM_008748Re-query CCDS DB by Protein ID:NP_032774Link to BLAST:NP_032774.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032774.1 663 O09112 663 100% 0 0

Chromosomal Locations for CCDS 22024.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 142081860 142083030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142083268 142083391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142083592 142083751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142084353 142084519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142088364 142088502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 142089944 142090174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1992 nt):
ATGGCTGGGGATCGGCTCCCGAGGAAGGTGATGGACGCAAAGAAACTGGCCAGCCTGCTGCGTGGCGGGC
CTGGGGGACCCTTGGTCATCGACAGCCGGTCCTTCGTGGAGTATAACAGCTGCCACGTGCTGAGCTCTGT
GAATATCTGCTGTTCAAAGCTGGTGAAGCGGCGCCTTCAGCAGGGAAAAGTGACAATTGCTGAGCTTATC
CAGCCTGCTACACGGAGCCAGGTGGATGCCACAGAACCACAGGATGTAGTGGTGTATGACCAGAGCACAC
GAGATGCCAGCGTGCTGGCAGCAGACAGCTTCCTGTCCATCCTGCTCAGCAAGCTGGACGGCTGCTTCGA
CAGTGTGGCCATCCTCACAGGAGGCTTCGCCACCTTCTCCTCCTGCTTCCCTGGCCTCTGTGAGGGCAAG
CCTGCCACTCTACCGTCCATGAGCCTCTCTCAGCCCTGCCTGCCTGTGCCCAGTGTTGGCCTGACCCGAA
TCCTGCCTCACCTCTACCTGGGCTCTCAGAAAGATGTCTTGAACAAGGATCTGATGACCCAAAACGGAAT
AAGCTATGTCCTCAATGCCAGCAACTCCTGCCCTAAACCGGACTTCATCTGTGAGAGCCGTTTCATGCGT
ATCCCCATCAATGACAACTACTGTGAAAAGCTGCTGCCCTGGCTGGACAAGTCCATCGAGTTTATTGATA
AAGCCAAGCTGTCCAGCTGCCAAGTCATTGTTCACTGTCTGGCTGGCATCTCTCGCTCTGCCACCATTGC
CATCGCGTACATCATGAAAACCATGGGCATGTCTTCTGACGACGCATACAGGTTTGTGAAGGATCGGCGC
CCCTCCATCTCGCCCAACTTCAACTTCCTGGGCCAGTTGCTGGAGTATGAGAGGAGTCTGAAGCTGCTGG
CTGCCCTGCAGACTGATGGACCTCACTTGGGGACCCCTGAGCCCCTCATGGGCCCGGCAGCAGGCATCCC
ACTGCCCCGGCTGCCACCATCTACCTCAGAGAGCGCTGCCACTGGGAGCGAGGCAGCCACCGCAGCCAGG
GAGGGCAGCCCAAGTGCTGGAGGGGATGCTCCGATCCCCAGCACAGCTCCAGCCACCAGCGCGCTGCAGC
AGGGCCTGCGTGGCCTGCACCTCTCCTCTGACCGCCTCCAGGACACCAACCGCCTCAAGCGTTCCTTTTC
CCTGGACATCAAGTCGGCCTATGCACCCAGCAGGAGGCCCGACTTTCCCGGCCCACCCGACCCCGGTGAA
GCCCCGAAGCTCTGCAAGCTGGACAGCCCGTCTGGGGGCACACTGGGCCTGCCCTCGCCCAGCCCAGACA
GCCCGGACTCCGTTCCAGAGTGCCGCCCACGACCCCGCCGGCGACGCCCCCCGGCTAGTTCGCCTGCCCG
CTCCCCCGCGCATGGTCTGGGCCTGAACTTTGGAGACACGGCCCGGCAGACTCCACGGCACGGCCTCTCG
GCCCTGTCGGCGCCCGGGCTGCCTGGCCCTGGCCAGCCGGCTGGCCCCGGGGGCTGGGTGCCGCCACTGG
ACTCCCCAGGCACACCGTCGCCCGACGGCCCCTGGTGCTTCAGCCCCGAGGGCGCGCAGGGTCCAGGCGC
TGTGTTCTCCGCCTTTGGCCGGGTAAGTGCAGGCGCACCTGGACCCGGTAACAGCAGCAGCAGCGGTGGT
GGTGGTGGTGGTGGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCAGCAACAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTAGTAGTAGTAGTAGTGACCTGCGGAGGCGGGATGT
GCGGACCGGCTGGCCCGAGGAGCCTGCTGCAGATGCACAGTTCAAGAGGCGCAGCTGCCAGATGGAGTTC
GAAGAGGGCATGGTGGAGGGGCGGGCACGTGGCGAGGAGCTGGCAGCCCTGGGCAAGCAAACCAGCTTCT
CTGGCAGCGTGGAGGTCATCGAAGTATCGTGA

Translation (663 aa):
MAGDRLPRKVMDAKKLASLLRGGPGGPLVIDSRSFVEYNSCHVLSSVNICCSKLVKRRLQQGKVTIAELI
QPATRSQVDATEPQDVVVYDQSTRDASVLAADSFLSILLSKLDGCFDSVAILTGGFATFSSCFPGLCEGK
PATLPSMSLSQPCLPVPSVGLTRILPHLYLGSQKDVLNKDLMTQNGISYVLNASNSCPKPDFICESRFMR
IPINDNYCEKLLPWLDKSIEFIDKAKLSSCQVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRR
PSISPNFNFLGQLLEYERSLKLLAALQTDGPHLGTPEPLMGPAAGIPLPRLPPSTSESAATGSEAATAAR
EGSPSAGGDAPIPSTAPATSALQQGLRGLHLSSDRLQDTNRLKRSFSLDIKSAYAPSRRPDFPGPPDPGE
APKLCKLDSPSGGTLGLPSPSPDSPDSVPECRPRPRRRRPPASSPARSPAHGLGLNFGDTARQTPRHGLS
ALSAPGLPGPGQPAGPGGWVPPLDSPGTPSPDGPWCFSPEGAQGPGAVFSAFGRVSAGAPGPGNSSSSGG
GGGGGGGGGGGGGGGGSSSSNSSSSSSSSSSSSSSSSSSSDLRRRDVRTGWPEEPAADAQFKRRSCQMEF
EEGMVEGRARGEELAALGKQTSFSGSVEVIEVS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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