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Report for CCDS18263.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18263.2 Reviewed, update pending Mus musculus 4 Tnfsf15 23 108 98 CCDS HistoryNCBI Gene:326623Re-query CCDS DB by CCDS ID:18263.2See the combined annotation on chromosome 4 in Sequence Viewer

Public Note for CCDS 18263.2
The coding region has been updated to extend the N-terminus. The use of an alternative upstream start codon, which appears to be rodent-specific, would result in a protein that is 18 aa longer at the N-terminal.

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Sequence IDs included in CCDS 18263.2

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062246.6 ENSMUSP00000050144.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062246.6Link to Ensembl Protein Viewer:ENSMUSP00000050144.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000062246Re-query CCDS DB by Protein ID:ENSMUSP00000050144
Original member Current member NCBI NM_177371.4 NP_796345.4 Pending alive Link to Nucleotide Sequence:NM_177371.4Link to Protein Sequence:NP_796345.4Re-query CCDS DB by Nucleotide ID:NM_177371Re-query CCDS DB by Protein ID:NP_796345Link to BLAST:NP_796345.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_796345.4 252 Q5UBV8 252 99.2064% 0 2

Chromosomal Locations for CCDS 18263.2


Notice: Due to asynchronous updates in annotation, the current annotation is not yet consistent.


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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