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Report for CCDS26421.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26421.1 Public Mus musculus 13 Hus1b 23 108 98 CCDS HistoryNCBI Gene:210554Re-query CCDS DB by CCDS ID:26421.1Re-query CCDS DB by GeneID:210554See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26421.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102943.1 ENSMUSP00000100007.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102943.1Link to Ensembl Protein Viewer:ENSMUSP00000100007.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000102943Re-query CCDS DB by Protein ID:ENSMUSP00000100007
Original member Current member NCBI NM_153072.2 NP_694712.1 Accepted alive Link to Nucleotide Sequence:NM_153072.2Link to Protein Sequence:NP_694712.1Re-query CCDS DB by Nucleotide ID:NM_153072Re-query CCDS DB by Protein ID:NP_694712Link to BLAST:NP_694712.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694712.1 276 Q8K572 276 100% 0 0

Chromosomal Locations for CCDS 26421.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 30946844 30947674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (831 nt):
ATGAGGTTTCGGGCCAGGATCACCAGCAAGCGTTTTATAGAGCTCTTCATTCAGGTCAGCAGCACCGTAG
CAAAGCTGGCGAAGGTCTGTGTGCTCCGTGTGTGCCCTGACAGGCTGTACTTCTGTCCCATGGGGCTGCT
GGGTGAGGCCCAGCTGTGGGGTGAGATGCGGCGCGATGTCTTCCACCACTTCTGCATGGAGGGTGCCTCG
CAGGAGTTCAACGAGATCTGTCTTGAGCTGATGTCTGAGCATCTGGCCAGAGCCGTGAAGAATGCCGGCA
ATGCTTCATCCCTGAAGCTCCAGCTCACCAACAAGCAGCGCCCCTGCCTTACTTTGGTGGTGGAGCTGGC
ATCGTGCCCCGGCCACACCCGTGCTGTGGTCCACGATTTGCCTGTGAGGGTGCTTCCCAGAAGGCGATGG
AAAGACTGCACAGAGCCCCATGTTCGGGGCTCTGATGTGAGTGTTTATCTGCCAGCTCTGAAGACCTTGA
AGAACATGGTGGAAAGGATGGCAAACGTGGGCAGTCATGTGCTGGTGGAAGCAAACCTCAATGGCAGAAT
GAACTTGACTGTAGAAACTGATAGAGTGACTATTAAAAGCTATTTTAAAAATCTTGGAAATCCTCCAAAT
GCCGTTCTGTGTATGTCTCAAGGCAGAGACCCAGAAACCATGGTGCAAGTGCGGGTGGATAATAGGAAGC
TTCTACAGTGTTTTGATGGACATCAGATAAACCCCACAATGGCCTTATGTAATATTTTGAGCAATACTCT
GCTTCATCTTGTTTTGGTTCATGAAGATATTTCTCTTCAGTATTTTATTCCTGCTTCATGA

Translation (276 aa):
MRFRARITSKRFIELFIQVSSTVAKLAKVCVLRVCPDRLYFCPMGLLGEAQLWGEMRRDVFHHFCMEGAS
QEFNEICLELMSEHLARAVKNAGNASSLKLQLTNKQRPCLTLVVELASCPGHTRAVVHDLPVRVLPRRRW
KDCTEPHVRGSDVSVYLPALKTLKNMVERMANVGSHVLVEANLNGRMNLTVETDRVTIKSYFKNLGNPPN
AVLCMSQGRDPETMVQVRVDNRKLLQCFDGHQINPTMALCNILSNTLLHLVLVHEDISLQYFIPAS


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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