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Report for CCDS27774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27774.1 Public Mus musculus 15 Tmem117 23 108 98 CCDS HistoryNCBI Gene:320709Re-query CCDS DB by CCDS ID:27774.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27774.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000080141.5 ENSMUSP00000079038.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000080141.5Link to Ensembl Protein Viewer:ENSMUSP00000079038.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000080141Re-query CCDS DB by Protein ID:ENSMUSP00000079038
Original member Current member NCBI NM_178789.4 NP_848904.1 Accepted alive Link to Nucleotide Sequence:NM_178789.4Link to Protein Sequence:NP_848904.1Re-query CCDS DB by Nucleotide ID:NM_178789Re-query CCDS DB by Protein ID:NP_848904Link to BLAST:NP_848904.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848904.1 514 Q8BH18 514 100% 0 0

Chromosomal Locations for CCDS 27774.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 94638087 94638363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94714862 94714994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94879381 94879480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 94931796 94931893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 95011316 95011475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 95074404 95074533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 95094359 95095005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1545 nt):
ATGGGTAAAGACTTCCGCTACTATTTCCAGCATCCTTGGTCTCGCATGATCGTGGCTTACCTGGTCATCT
TCTTTAACTTCTTGATATTCGCTGAGGACCCAGTCTCTCACAGCCAAACAGAAGCTAATGTTATTGTTGT
TGGAAACTGTTTTTCATTTGTAACAAATAAATACCCTAGAGGAGTTGGCTGGAGGATTTTGAAGGTGCTT
CTATGGCTACTGGCCATTCTCATAGGACTGATTGCTGGCAAGTTCCTCTTCCATCAGCGTTTATTTGGCC
AGTTGCTCCGGTTAAAAATGTTCCGGGAAGACCATGGGTCGTGGATGACGATGTTCTTCAGCACAATTCT
CTTTCTCTTCATCTTCTCTCACATCTATAACACCATCCTTCTGATGGACGGGAACATGGGAGCTTATCTC
ATCACTGACTATATGGGCATCCGCAATGAAAGTTTCATGAAACTAGCTGCTGTGGGGACCTGGATGGGGG
ACTTTGTCACAGCTTGGATGGTAACTGATATGATGCTTCAAGACAAGCCCTACCCTGACTGGGGGAAATC
CGCAAGAGCTTTCTGGAAGAAAGGCAACGTGAGGATCATTTTATTCTGGACCGTCCTCTTCACCCTGACT
TCCGTGGTGGTGCTTGTCATCACGACCGACTGGATCAGCTGGGACAAACTGAACCGTGGGTTTTTGCCCA
GTGATGAGGTCTCCCGAGCCTTTCTTGCTTCTTTCATCTTGGTCTTTGACCTCCTTATTGTGATGCAGGA
CTGGGAATTCCCACACTTCATGGGCGACGTTGATGTGAATCTCCCCGGGTTGCACACGCCTCACATGCAG
TTCAAGATTCCCTTCTTCCAGAAGATCTTCAAGGAGGAATACCGCATTCACATAACAGGTAAATGGTTTA
ACTACGGAATTATCTTTCTCGTCTTGATTTTGGACCTGAATATGTGGAAGAACCAGATATTTTACAAACC
TCATGAATATGGACAGTATATTGGCCCAGGGCAGAAGATATACACAGTGAAAGACTCTGAAAGTTTAAAG
GATTTAAATAGAACCAAGCTATCCTGGGAATGGCGGTCCAATCACACTAATCCTCAGACTAATAAAACCT
ACGTTGAAGGTGACATGTTCTTACACAGCAGGTTCATAGGGGCTAGCCTAGATGTCAAGTGTCTGGCTTT
TGTTCCAAGTTTGATAGCTTTTGTGTGGTTTGGATTCTTCATTTGGTTCTTTGGACGGTTTCTGAAAAAT
GAGCAAGGGATGGAGAATCAAGATAAAACTTATACTCGCATGAAAAGGAAATCCCCCTCGGAACACAGCA
AAGATATGGGAATCACCCGAGAAAACACCCAGGTCTCTGTGGAAGATCCTCTGAATGACCCTGCCTTGGT
TTGTATCAGGTCTGACTTTAACGAGATAGTCTACAAGTCCTCCCATCTGACTTCAGAAAACTTGAGCTTA
CATCTGAAGGAATCTACCAGTGAGGTGGAGGCTGAGCAAGAGCCGGCAGCCTCTCAAAGGATGAGGACGA
ACTAG

Translation (514 aa):
MGKDFRYYFQHPWSRMIVAYLVIFFNFLIFAEDPVSHSQTEANVIVVGNCFSFVTNKYPRGVGWRILKVL
LWLLAILIGLIAGKFLFHQRLFGQLLRLKMFREDHGSWMTMFFSTILFLFIFSHIYNTILLMDGNMGAYL
ITDYMGIRNESFMKLAAVGTWMGDFVTAWMVTDMMLQDKPYPDWGKSARAFWKKGNVRIILFWTVLFTLT
SVVVLVITTDWISWDKLNRGFLPSDEVSRAFLASFILVFDLLIVMQDWEFPHFMGDVDVNLPGLHTPHMQ
FKIPFFQKIFKEEYRIHITGKWFNYGIIFLVLILDLNMWKNQIFYKPHEYGQYIGPGQKIYTVKDSESLK
DLNRTKLSWEWRSNHTNPQTNKTYVEGDMFLHSRFIGASLDVKCLAFVPSLIAFVWFGFFIWFFGRFLKN
EQGMENQDKTYTRMKRKSPSEHSKDMGITRENTQVSVEDPLNDPALVCIRSDFNEIVYKSSHLTSENLSL
HLKESTSEVEAEQEPAASQRMRTN


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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