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Report for CCDS15473.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15473.1 Public Mus musculus 1 Olfml2b 23 108 98 CCDS HistoryNCBI Gene:320078Re-query CCDS DB by CCDS ID:15473.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15473.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000046792.8 ENSMUSP00000047291.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000046792.8Link to Ensembl Protein Viewer:ENSMUSP00000047291.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000046792Re-query CCDS DB by Protein ID:ENSMUSP00000047291
Original member NCBI NM_177068.4 NP_796042.3 Updated not alive Link to Nucleotide Sequence:NM_177068.4Link to Protein Sequence:NP_796042.3Re-query CCDS DB by Nucleotide ID:NM_177068Re-query CCDS DB by Protein ID:NP_796042
Current member NCBI NM_177068.5 NP_796042.3 Accepted alive Link to Nucleotide Sequence:NM_177068.5Link to Protein Sequence:NP_796042.3Re-query CCDS DB by Nucleotide ID:NM_177068Re-query CCDS DB by Protein ID:NP_796042Link to BLAST:NP_796042.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_796042.3 746 Q3V1G4 746 100% 0 0

Chromosomal Locations for CCDS 15473.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 170644922 170645095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170647682 170647945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170649736 170649843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170662359 170662535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170666572 170666797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170668751 170669263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170681037 170681213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 170681724 170682325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2241 nt):
ATGGCCTATCCCCTGCCATTGGTTCTCTGCTTTGCTCTGGTGGTGGCACAGGTCTGGGGGTCCACTACAC
CTCCCACAGGGACAAGCGAGCCCCCTGATGTGCAAACAGTGGAGCCCACGGAAGATGACATTCTGCAAAA
CGAGGCGGACAACCAGGAGAACGTTTTATCTCAGCTGCTGGGAGACTATGACAAGGTCAAGGCTGTGTCT
GAGGGCTCTGACTGTCAGTGCAAGTGTGTGGTGAGACCGCTGGGCCGAGATGCCTGCCAGAGGATCAACC
AGGGGGCTTCCAGGAAGGAAGACTTCTACACTGTGGAAACCATCACCTCGGGCTCATCCTGTAAATGTGC
TTGTGTTGCTCCTCCGTCTGCCGTCAATCCCTGTGAGGGAGACTTCAGGCTCCAGAAGCTTCGGGAGGCT
GACAGCCGAGATTTGAAGCTGTCTACAATTATAGACCTGTTGGAAGGTGCTTTCTACGGCCTGGACCTCC
TAAAGCTGCATTCGGTTACCACTAAACTCGTGGGGCGAGTGGATAAACTGGAGGAGGAAGTCTCTAAGAA
CCTCACCAAGGAGAATGAGCAAATCAAAGAGGATGTGGAAGAAATCCGAACGGAGCTGAACAAGCGAGGC
AAGGAGAACTGCTCTGACAACACCCTAGAGAGCATGCCAGACATCCGCTCAGCCCTGCAGAGGGATGCGG
CTGCAGCCTATGCCCACCCAGAGTATGAAGAACGGTTTCTGCAGGAGGAAACTGTGTCACAGCAGATCAA
CTCCATCGAACTCCTGAGGACGCAGCCACTGGTCCCTCCTGCAGCGATGAAGCCGCAGCGGCCCCTGCAG
AGACAGGTGCACCTGAGAGGTCGGCTGGCCTCCAAGCCCACCGTCATCAGGGGAATCACCTACTATAAAG
CCAAGGTCTCTGAGGAGGAAAATGACATAGAAGAGCAGCACGATGAGCTTTTCAGTGGCGACAGTGGAGT
GGACTTGCTGATAGAAGATCAGCTTCTAAGACAGGAAGACCTACTGACAAGTGCCACCCGGAGGCCAGCA
ACCACTCGTCACACTGCTGCTGTCACGACTGATGCGAGCATTCAGGCCGCAGCCTCATCCTCAGAGCCTG
CACAGGCCTCTGCCTCAGCATCCAGCTTTGTTGAGCCTGCTCCTCAGGCCTCCGATAGAGAGCTCTTGGC
AACCCCACAGACTACCACAGTGTTTCCAGAGCCCACGGAGGTGATGCCTTCTACCCAAGTCTCACCCACC
ACCGTGGCCCACACAGCTGTCCAGCCACTTCCAGCAATGGTTCCTGGGGACATATTTGTGGAAGCTCTAC
CCTTGGTCCCTCTGTTACCTGACACAGTTGGGACAGACATGCCAGAGGAAGAGGGGACTGCAGGGCAGGA
AGCAACCTCTGCTGGTCCCATCCTGAGCCCTGAAGAAGAAGATGACATTCGGAATGTGATAGGAAGGTGC
AAGGACACCCTCTCTACAATCACAGGACCGACCACCCAGAACACATATGGACGGAATGAAGGGGCCTGGA
TGAAGGACCCCCTAGCCAAGGACGACCGCATTTACGTAACCAACTATTACTATGGCAACACACTGGTTGA
GTTCCGAAACCTGGAGAACTTCAAACAAGGTCGCTGGAGCAATTCCTACAAGCTTCCATACAGCTGGATT
GGCACGGGTCACGTGGTCTACAACGGCGCCTTCTACTATAACCGGGCCTTCACCCGAAACATCATCAAGT
ATGACCTGAAGCAGCGTTATGTGGCTGCCTGGGCCATGCTGCACGATGTGGCCTATGAGGAGGCCACTCC
TTGGCGGTGGCAGGGTCACTCGGATGTGGACTTTGCTGTGGATGAGAATGGCCTGTGGCTTATCTACCCA
GCTCTGGATGATGAAGGTTTCAACCAGGAGGTCATTGTCCTGAGCAAGCTCAATGCCGTGGACCTGAGCA
CGCAGAAGGAGACCACGTGGCGCACTGGGCTCCGGAGGAATTTCTATGGCAACTGCTTTGTCATCTGTGG
GGTACTATATGCTGTGGACAGCTATAACCAGAGGAATGCCAACATCTCCTATGCCTTTGACACACACACC
AACACACAGATTGTCCCTAGGCTGCTGTTTGAGAATGAATATTCGTACACCACCCAGATAGACTACAACC
CCAAGGACCGCCTCCTCTATGCCTGGGACAATGGCCACCAGGTCACCTACCATGTCATCTTTGCCTACTG
A

Translation (746 aa):
MAYPLPLVLCFALVVAQVWGSTTPPTGTSEPPDVQTVEPTEDDILQNEADNQENVLSQLLGDYDKVKAVS
EGSDCQCKCVVRPLGRDACQRINQGASRKEDFYTVETITSGSSCKCACVAPPSAVNPCEGDFRLQKLREA
DSRDLKLSTIIDLLEGAFYGLDLLKLHSVTTKLVGRVDKLEEEVSKNLTKENEQIKEDVEEIRTELNKRG
KENCSDNTLESMPDIRSALQRDAAAAYAHPEYEERFLQEETVSQQINSIELLRTQPLVPPAAMKPQRPLQ
RQVHLRGRLASKPTVIRGITYYKAKVSEEENDIEEQHDELFSGDSGVDLLIEDQLLRQEDLLTSATRRPA
TTRHTAAVTTDASIQAAASSSEPAQASASASSFVEPAPQASDRELLATPQTTTVFPEPTEVMPSTQVSPT
TVAHTAVQPLPAMVPGDIFVEALPLVPLLPDTVGTDMPEEEGTAGQEATSAGPILSPEEEDDIRNVIGRC
KDTLSTITGPTTQNTYGRNEGAWMKDPLAKDDRIYVTNYYYGNTLVEFRNLENFKQGRWSNSYKLPYSWI
GTGHVVYNGAFYYNRAFTRNIIKYDLKQRYVAAWAMLHDVAYEEATPWRWQGHSDVDFAVDENGLWLIYP
ALDDEGFNQEVIVLSKLNAVDLSTQKETTWRTGLRRNFYGNCFVICGVLYAVDSYNQRNANISYAFDTHT
NTQIVPRLLFENEYSYTTQIDYNPKDRLLYAWDNGHQVTYHVIFAY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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