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Report for CCDS36868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36868.1 Public Mus musculus 14 Ercc6 23 108 98 CCDS HistoryNCBI Gene:319955Re-query CCDS DB by CCDS ID:36868.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36868.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000066807.7 ENSMUSP00000066256.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000066807.7Link to Ensembl Protein Viewer:ENSMUSP00000066256.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000066807Re-query CCDS DB by Protein ID:ENSMUSP00000066256
Original member Current member NCBI NM_001081221.2 NP_001074690.1 Accepted alive Link to Nucleotide Sequence:NM_001081221.2Link to Protein Sequence:NP_001074690.1Re-query CCDS DB by Nucleotide ID:NM_001081221Re-query CCDS DB by Protein ID:NP_001074690Link to BLAST:NP_001074690.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001074690.1 1481 F8VPZ5 1481 100% 0 0

Chromosomal Locations for CCDS 36868.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 32516957 32517378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32518943 32519063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32520948 32521059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32526149 32526878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32541226 32541354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32546745 32546903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32552575 32552710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32557839 32558009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32558428 32558604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32560709 32560825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32562556 32562651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32566243 32566458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32566784 32566894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32567508 32567627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32567987 32568081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32569513 32569658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32569739 32570431 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32574806 32575010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32575754 32575826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 32576686 32577102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4446 nt):
ATGTTCCACGAGGAAGTTCCCAACTCCACTCACCCTCAGGAGCAAGACTGTTTACCAAGTCAGCATGCCA
ATGCTTACAAAGACATGCCAGTTGGGCAGGAGAATGGTGGGGTCTCAGAGGCCGGGGAGTGCCTCTCCTC
TACTTCCTGTGAGTATGGGCCATCCACATCTGCTGAAGCTTGTGTGTTGGCAGCCACAAGGCGTGGGCCG
ACCCTGCTACACATTGATCGGCATCAGATCCCTGCAGTTGAGCCCAGTGCTCAGGCCCTGGAGCTGCAGG
GCCTGGGTGTGGACGTCTATGACCAGGCTGTCCTGGAACAAGGCGTGCTTCAGCAGGTGGACAGTGCGAT
GCATGAGGCCAGCTGTGTGGCCCAGCTTGCTGATGCGGAGAAGGAGTATCAGTCAGTCCTGGATGACCTC
ATGTCATGTACAACATCCCTGAGGCAAATCAATAAAATTATAGAGCAACTTAGCCCTCAAGCTGCCAGCA
ACAGAGACATCAACAGGAAACTAGATTCCGTGAAGCGACAGAAGTATAACAAGGAACAACAGCTAAAGAA
GATAACTGCAAAACAGAAACGTCTCCAGGCCATTCTCGGAGGGGCTGGGGTCCAAGTGGAACTGGATCAT
GCCAGCCTAGAGGAGGACGATGCAGAGCCAGGGCCATCATGTCTTGGCAGTATGCTCATGCCTGCCCAGG
AGACCGCCTGGGAGGAGCTTATCCGCACTGGCCAGATGACACCGTTTGGTACCCCAGCCCCTCAGAAACA
GGAGAAAAAGCCCAGAAAAATAATGCTGAATGAAGCATCAGGCTTTGAAAAATATTTGGCAGAGCAAGCA
CAACTTTCGTTTGAAAGGAAGAAACAAGCTGCTACTAAAAGAACAGCTAAAAAAGCTATAGTCATATCCG
AGTCAAGCCGAGCAGCAATTGAAACCAAGGCAGACCAGAGAAGCCAAGTGCTCTCTCAGACAGACAAGCG
CCTGAAGAAGCACAGCAGGAAACTCCAGAGGAGGGCGCTGCAGTTCCAGGGCAAAGTGGGATTGCCGAGC
GGGAAGAAACCTTTGGAGCCTGAGGTGAGGCCAGAGGCCGAGGGAGACACTGAGGGTGAGGAGTCTGGGT
CCTCTCCCACCGATGGGGAGGAGGAGGAAGAACAAGAGGAGGAGGAAGGGGTAGCCAGCCTGTCTTCTGA
TGACGTTAGCTATGAGCTGAAGCCTCTTCGGAAGAGGCAGAAATACCAGAAGAAAGTCCCAGTTCAGGAG
ATCGACGATGACTTCTTTCCAAGTTCTGAGGAGGAAGATGAAGCTATGGAAGGAAGAGGAGGAGGCCGAA
AGGTAGCCAGGCGCCAAGACGATGGAGATGAGGATTATTATAAGCAGCGGTTAAGGAGGTGGAACAGGCT
GAGGCTGCAGGACAAAGAGAAACGCCTGAAGCTTGAAGATGATTCTGAGGAGAGCGATGCCGAATTTGAC
GAAGGTTTCAAAGTGCCGGGTTTTCTGTTCAAAAAGCTCTTTAAGTATCAGCAGACAGGTGTTAGGTGGC
TGTGGGAATTGCACTGCCAGCAGGCAGGAGGAATTCTGGGAGACGAAATGGGATTGGGCAAGACCATCCA
GATAATTGCCTTCTTGGCAGGTCTGAGCTACAGCAAGATCAGGACTCGCGGTTCAAATTACAGGTTCGAG
GGACTAGGCCCCACTATAATTGTCTGCCCAACGACAGTGATGCATCAGTGGGTGAAGGAATTCCACACGT
GGTGGCCTCCATTCAGAGTGGCAGTTCTGCATGAAACAGGTTCCTACACCCACAAAAAGGAGAGGCTGAT
TCGAGATATTGTTTATTGTCATGGAGTTTTGATAACTTCATATTCATACATCCGACTGATGCAAGATGAC
ATTAGCAGACATGACTGGCACTACGTCATCTTAGATGAAGGACACAAAATTCGAAATCCAAATGCTGCAG
TCACCCTTGCTTGCAAACAGTTCCGGACACCTCATCGGATTATCTTGTCTGGCTCACCGATGCAGAATAA
CCTCCGAGAGCTGTGGTCACTCTTCGACTTCATCTTCCCAGGAAAGCTGGGCACATTGCCTGTGTTTATG
GAGCAGTTCTCTGTCCCCATCACCATGGGAGGCTATTCCAATGCTTCCCCAGTACAGGTTAAAACTGCTT
ATAAGTGTGCATGTGTCTTAAGAGACACGATAAACCCGTACTTACTGCGGAGAATGAAATCAGATGTCAA
GATGAGCCTTTCGTTGCCAGATAAAAATGAGCAGGTCTTATTTTGCCGTCTAACTGATGAGCAGCATAAA
GTCTACCAGAATTTCATTGATTCTAAAGCAGTCTACAGGATTCTCAATGGAGAAAATCAGATTTTCTCTG
GACTTGTAGCGCTGAGGAAGATCTGCAACCACCCTGACCTCTTTTCTGGCGGCCCCAAGAACGCCAGTGG
TCCTCCAGAGGATGAGCTGGAAGAAGAGCAGTTTGGACACTGGAGACGCTCTGGGAAAATGATTGTTGTT
GAGTCTTTGCTGAAAATATGGCACAGGCAGGGTCAGCGGGTGCTGCTGTTTTCCCAGTCCAGGCAGATGC
TACACATACTGGAAGTGTTCCTGAGAGCCCATAAGTATTCCTATCTCAAGATGGATGGGACCACCACCAT
AGCGTCAAGACAGCCGCTGATTACAAAATACAATGAGGACACGTCCATCTTTGTCTTTCTTCTGACCACA
CGGGTGGGTGGCTTAGGAGTGAACCTGACCGGTGCCAACAGAGTCATCATCTACGACCCAGACTGGAATC
CAAGCACCGACACACAGGCCCGGGAGCGAGCATGGAGGATAGGTCAGAAGAAGCAGGTGACTGTCTACAG
GCTTCTGACGGCTGGCACCATTGAGGAAAAGATCTACCACCGACAAATCTTCAAGCAATTTTTGACAAAC
AGAGTGCTAAAAGACCCAAAACAAAGGCGCTTTTTCAAATCCAACGATCTCTATGAGCTGTTCACTCTGA
CCAGTCCTGACGCCTCCCAGGGCACTGAGACAAGTGCTATTTTTGCAGGAACGGGCTCCAGTATTCAGAC
ACCCAAATGCCAGTTAAAAAAAAGGACTTCCACAGTCCTGGGAACAGATCCCAAATGCAAGAAGCCCCCT
GTTTCTGACACACCTGCAAATGCTGCCACCCTGATTGGAGAAAAACCTAAGGCGGCGGGAGCTACAGGAA
GAAGTGTCACTTCTGGAGAAAGTGGTCCTTTCAAAGGCGACCATGACACAAATGGGAACAGAGCTAGCAG
TGTTGCTTTTGGAGAAGAGACAGATGCAGGGTCCACACTGGAGCATCTCTCAGTGATGAGTGGAGATGGG
AAGCATTCAGATTCTCCAACAGTTGACCACACATCCAGGCCACCAGTGGAGGCAAGCACCAGTGAGAAGC
AGGGTTCTTCCTATGCAGGGGCGCGCTGCCAGGCTCAGACAGAACCTGTTCCCATGAGTGAACAAATGGA
AGGTCAGTTTTCTAAGTACAAATCCAAAAGGAAGCATGATGCATCTGAGGAAGAGACCACAGAGAAACGT
CCACAGCCCAAGCAAAAGGCCAAGAACTCCAAGCATTGCAGAGATGCTAAGTTTGAGGGAACTCGAGTCC
CGCACCTGGTGAAGAAAAGACGGTACCGCCAGCAAACCAGTGAGCAGGAGGGCGGAGCCAAGGACCGGAG
CAGCGATGATTATGTGTTGGAAAAGCTTTTCAAAAAATCAGTGGGCGTGCACAGCGTCGTGAGGCATGAT
GCCATCATAGATGGGTCCAGTCCAGATTATGTGCTGGTGGAAGCAGAAGCCAACCGAGTGGCTCAGGACG
CCTTGAAAGCTCTGAGGCTCTCTCGTCAGCAATGCCTGGGGGCAGCATCTGGTGTTCCCACCTGGACTGG
CCACAGGGGGATTTCTGGTGCACCAACAGGAGTAAAGAATAGGTTCGGTCAGAAAAGGGACTCCAGCCTC
CCTGTGCAGCATCCTTCATCACTAACAGAAAAGACTCAGAACAACATGAAAAAGGAGGGAAAAGCTCACA
CCCCTGAGCACTTCAGTGGCAAAGAAGATGGAGCATCTGTGTCTGGAGCGCCCAGTTCCTCCTCCCTCTT
GGCCAGAATGCGAGCAAGAAACCACATGATTTTGCCGGAGCGCTTAGAGAGTGACAGTGAACATCTTGCT
GAGGCTGCTGCCGTGCCTCCCTGCGGCACCGAACACGACGACCTTCTGGTGGACATGAGGAACTTCATTG
CTTTCCAGGCCCAGGTGGATGGCCAGGCCAGCACTCAGGAAATCCTGCAGGAGTTTGAGTCCAAGCTGTC
CGTGGCACAGTCCTGTGTCTTCCGAGAACTGCTGAGAAATCTGTGCAATTTCCATAGAACTCCTGGTGGG
GAAGGGATTTGGAAGCTGAAGCCAGAATACTGCTAA

Translation (1481 aa):
MFHEEVPNSTHPQEQDCLPSQHANAYKDMPVGQENGGVSEAGECLSSTSCEYGPSTSAEACVLAATRRGP
TLLHIDRHQIPAVEPSAQALELQGLGVDVYDQAVLEQGVLQQVDSAMHEASCVAQLADAEKEYQSVLDDL
MSCTTSLRQINKIIEQLSPQAASNRDINRKLDSVKRQKYNKEQQLKKITAKQKRLQAILGGAGVQVELDH
ASLEEDDAEPGPSCLGSMLMPAQETAWEELIRTGQMTPFGTPAPQKQEKKPRKIMLNEASGFEKYLAEQA
QLSFERKKQAATKRTAKKAIVISESSRAAIETKADQRSQVLSQTDKRLKKHSRKLQRRALQFQGKVGLPS
GKKPLEPEVRPEAEGDTEGEESGSSPTDGEEEEEQEEEEGVASLSSDDVSYELKPLRKRQKYQKKVPVQE
IDDDFFPSSEEEDEAMEGRGGGRKVARRQDDGDEDYYKQRLRRWNRLRLQDKEKRLKLEDDSEESDAEFD
EGFKVPGFLFKKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE
GLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHKKERLIRDIVYCHGVLITSYSYIRLMQDD
ISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFM
EQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHK
VYQNFIDSKAVYRILNGENQIFSGLVALRKICNHPDLFSGGPKNASGPPEDELEEEQFGHWRRSGKMIVV
ESLLKIWHRQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKYNEDTSIFVFLLTT
RVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTN
RVLKDPKQRRFFKSNDLYELFTLTSPDASQGTETSAIFAGTGSSIQTPKCQLKKRTSTVLGTDPKCKKPP
VSDTPANAATLIGEKPKAAGATGRSVTSGESGPFKGDHDTNGNRASSVAFGEETDAGSTLEHLSVMSGDG
KHSDSPTVDHTSRPPVEASTSEKQGSSYAGARCQAQTEPVPMSEQMEGQFSKYKSKRKHDASEEETTEKR
PQPKQKAKNSKHCRDAKFEGTRVPHLVKKRRYRQQTSEQEGGAKDRSSDDYVLEKLFKKSVGVHSVVRHD
AIIDGSSPDYVLVEAEANRVAQDALKALRLSRQQCLGAASGVPTWTGHRGISGAPTGVKNRFGQKRDSSL
PVQHPSSLTEKTQNNMKKEGKAHTPEHFSGKEDGASVSGAPSSSSLLARMRARNHMILPERLESDSEHLA
EAAAVPPCGTEHDDLLVDMRNFIAFQAQVDGQASTQEILQEFESKLSVAQSCVFRELLRNLCNFHRTPGG
EGIWKLKPEYC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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