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Report for CCDS31305.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31305.1 Public Homo sapiens 10 HMX2 24 110 108 CCDS HistoryNCBI Gene:3167Re-query CCDS DB by CCDS ID:31305.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31305.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000339992.4 ENSP00000341108.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000339992.4Link to Ensembl Protein Viewer:ENSP00000341108.3Re-query CCDS DB by Nucleotide ID:ENST00000339992Re-query CCDS DB by Protein ID:ENSP00000341108
Original member Current member NCBI NM_005519.2 NP_005510.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005519.2Link to Protein Sequence:NP_005510.1Re-query CCDS DB by Nucleotide ID:NM_005519Re-query CCDS DB by Protein ID:NP_005510Link to BLAST:NP_005510.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005510.1 273 A2RU54 273 100% 0 0

Chromosomal Locations for CCDS 31305.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 123148379 123148646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 123149570 123150123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGGGCAGCAAAGAAGATGCGGGCAAGGGGTGTCCGGCGGCCGGTGGCGTCTCCAGCTTCACCATCCAGT
CCATCCTGGGCGGGGGCCCCTCGGAGGCACCGCGGGAGCCCGTCGGCTGGCCAGCCAGGAAGCGCAGCCT
GTCCGTGTCCTCGGAGGAGGAGGAGCCGGACGACGGCTGGAAGGCGCCCGCCTGCTTCTGCCCAGACCAG
CACGGCCCTAAGGAGCAGGGCCCCAAGCACCATCCCCCCATCCCTTTTCCTTGCCTGGGTACCCCCAAGG
GCAGCGGAGGCTCGGGCCCGGGCGGCTTGGAGCGCACGCCTTTCCTCTCTCCTTCGCACTCGGACTTTAA
AGAAGAGAAAGAGAGGCTCCTGCCCGCGGGCTCGCCCTCGCCGGGGTCCGAGCGGCCGCGGGACGGCGGC
GCTGAGCGGCAGGCCGGCGCGGCCAAGAAGAAGACGCGCACCGTCTTTTCGCGCAGCCAGGTGTACCAGC
TCGAGTCCACCTTCGACATGAAGCGCTACCTGAGCAGCTCGGAGCGCGCCTGCCTCGCCTCCAGCCTGCA
GCTCACGGAGACCCAGGTAAAGACTTGGTTCCAGAACCGCCGCAACAAGTGGAAGCGGCAGCTCTCGGCT
GAGCTGGAGGCGGCCAACATGGCGCACGCGTCGGCGCAGACTCTGGTGAGCATGCCGCTGGTGTTCCGGG
ACAGTTCGCTGCTGCGCGTGCCGGTGCCGCGCTCGCTCGCCTTTCCCGCGCCGCTCTACTACCCGGGAAG
CAACCTCTCGGCCTTACCTCTCTACAACCTATACAACAAGCTCGACTACTGA

Translation (273 aa):
MGSKEDAGKGCPAAGGVSSFTIQSILGGGPSEAPREPVGWPARKRSLSVSSEEEEPDDGWKAPACFCPDQ
HGPKEQGPKHHPPIPFPCLGTPKGSGGSGPGGLERTPFLSPSHSDFKEEKERLLPAGSPSPGSERPRDGG
AERQAGAAKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQLSA
ELEAANMAHASAQTLVSMPLVFRDSSLLRVPVPRSLAFPAPLYYPGSNLSALPLYNLYNKLDY


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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