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Report for CCDS29202.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
29202.1 Public Mus musculus 18 Spry4 23 108 98 CCDS HistoryNCBI Gene:24066Re-query CCDS DB by CCDS ID:29202.1Re-query CCDS DB by GeneID:24066See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 29202.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000025295.7 ENSMUSP00000025295.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000025295.7Link to Ensembl Protein Viewer:ENSMUSP00000025295.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000025295Re-query CCDS DB by Protein ID:ENSMUSP00000025295
Original member Current member NCBI NM_011898.3 NP_036028.2 Accepted alive Link to Nucleotide Sequence:NM_011898.3Link to Protein Sequence:NP_036028.2Re-query CCDS DB by Nucleotide ID:NM_011898Re-query CCDS DB by Protein ID:NP_036028Link to BLAST:NP_036028.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036028.2 300 Q9WTP2 300 100% 0 0

Chromosomal Locations for CCDS 29202.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 38589806 38590708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (903 nt):
ATGGAGCCCCCGGTTCCACAGAGCAGCGTCCCTGTGAATCCCAGCTCAGTCATGGTGCAGCCCCTCCTTG
ACAGCAGAGCGCCCCACAGCCGGCTCCAGCACCCACTCACCATCTTACCCATTGACCAGATGAAGACCAG
CCACGTGGAGAATGACTACATAGACAACCCTAGCCTGGCCCCTGCCACGGGTCCCAAGCGGCCCCGGGGC
GGGCCACCAGAGCTGGCTCCTACACCTGCCCGCTGTGACCAGGATATTACTCACCACTGGATCTCCTTCA
GCGGTCGGCCCAGCTCTGTAAGCAGCAGTAGCAGCACTTCCTCCGACCAGAGGCTCCTAGATCACATGGC
TCCACCGCCCGTGGCTGAGCAGGCCTCACCCAGGGCTGTGCGCCTCCAGCCCAAGGTGGTTCACTGTAAG
CCGCTGGACCTCAAAGGCCCGACAGCTCCGCCAGAGCTAGACAAGCACTTCTTGCTGTGTGAGGCCTGTG
GAAAGTGTAAGTGCAAAGAGTGTGCGTCCCCTCGGACGTTACCTTCCTGCTGGGTCTGCAACCAGGAGTG
CCTGTGCTCGGCTCAGACGCTGGTCAACTATGGCACATGCATGTGTCTGGTGCAAGGTATCTTCTATCAC
TGTACTAATGAGGATGATGAGGGCTCTTGCGCCGACCACCCCTGCTCCTGTTCCGGCTCCAACTGCTGCG
CCCGCTGGTCCTTCATGGGCGCCCTCTCTGTGGTGCTGCCCTGTCTGCTGTGCTACCTGCCGGCCACAGG
CTGCGTCAAGCTGGCCCAGCGAGGCTACGACCGCCTGAGACGCCCCGGTTGCCGCTGCAAGCACACGAAC
AGCGTCATCTGCAAGGCAGCCAGTGGGGACACCAAGACCAGCAGGTCTGACAAGCCTTTCTGA

Translation (300 aa):
MEPPVPQSSVPVNPSSVMVQPLLDSRAPHSRLQHPLTILPIDQMKTSHVENDYIDNPSLAPATGPKRPRG
GPPELAPTPARCDQDITHHWISFSGRPSSVSSSSSTSSDQRLLDHMAPPPVAEQASPRAVRLQPKVVHCK
PLDLKGPTAPPELDKHFLLCEACGKCKCKECASPRTLPSCWVCNQECLCSAQTLVNYGTCMCLVQGIFYH
CTNEDDEGSCADHPCSCSGSNCCARWSFMGALSVVLPCLLCYLPATGCVKLAQRGYDRLRRPGCRCKHTN
SVICKAASGDTKTSRSDKPF


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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