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Report for CCDS55136.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55136.1 Public Homo sapiens 7 MEPCE 24 110 108 CCDS HistoryNCBI Gene:56257Re-query CCDS DB by CCDS ID:55136.1Re-query CCDS DB by GeneID:56257See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55136.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000414441.5 ENSP00000400875.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000414441.5Link to Ensembl Protein Viewer:ENSP00000400875.1Re-query CCDS DB by Nucleotide ID:ENST00000414441Re-query CCDS DB by Protein ID:ENSP00000400875
Original member Current member EBI ENST00000695111.1 ENSP00000511702.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695111.1Link to Ensembl Protein Viewer:ENSP00000511702.1Re-query CCDS DB by Nucleotide ID:ENST00000695111Re-query CCDS DB by Protein ID:ENSP00000511702
Original member Current member EBI ENST00000497759.2 ENSP00000511703.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000497759.2Link to Ensembl Protein Viewer:ENSP00000511703.1Re-query CCDS DB by Nucleotide ID:ENST00000497759Re-query CCDS DB by Protein ID:ENSP00000511703
Original member Current member EBI ENST00000479201.2 ENSP00000511704.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000479201.2Link to Ensembl Protein Viewer:ENSP00000511704.1Re-query CCDS DB by Nucleotide ID:ENST00000479201Re-query CCDS DB by Protein ID:ENSP00000511704
Original member Current member EBI ENST00000695664.1 ENSP00000512092.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695664.1Link to Ensembl Protein Viewer:ENSP00000512092.1Re-query CCDS DB by Nucleotide ID:ENST00000695664Re-query CCDS DB by Protein ID:ENSP00000512092
Original member Current member EBI ENST00000695707.1 ENSP00000512107.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695707.1Link to Ensembl Protein Viewer:ENSP00000512107.1Re-query CCDS DB by Nucleotide ID:ENST00000695707Re-query CCDS DB by Protein ID:ENSP00000512107
Original member Current member EBI ENST00000695708.1 ENSP00000512108.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695708.1Link to Ensembl Protein Viewer:ENSP00000512108.1Re-query CCDS DB by Nucleotide ID:ENST00000695708Re-query CCDS DB by Protein ID:ENSP00000512108
Original member Current member NCBI NM_001194990.2 NP_001181919.1 Accepted alive Link to Nucleotide Sequence:NM_001194990.2Link to Protein Sequence:NP_001181919.1Re-query CCDS DB by Nucleotide ID:NM_001194990Re-query CCDS DB by Protein ID:NP_001181919Link to BLAST:NP_001181919.1
Original member Current member NCBI NM_001194991.2 NP_001181920.1 Accepted alive Link to Nucleotide Sequence:NM_001194991.2Link to Protein Sequence:NP_001181920.1Re-query CCDS DB by Nucleotide ID:NM_001194991Re-query CCDS DB by Protein ID:NP_001181920Link to BLAST:NP_001181920.1
Original member Current member NCBI NM_001194992.2 NP_001181921.1 Accepted alive Link to Nucleotide Sequence:NM_001194992.2Link to Protein Sequence:NP_001181921.1Re-query CCDS DB by Nucleotide ID:NM_001194992Re-query CCDS DB by Protein ID:NP_001181921Link to BLAST:NP_001181921.1
Original member Current member NCBI NM_001363486.2 NP_001350415.1 Accepted alive Link to Nucleotide Sequence:NM_001363486.2Link to Protein Sequence:NP_001350415.1Re-query CCDS DB by Nucleotide ID:NM_001363486Re-query CCDS DB by Protein ID:NP_001350415Link to BLAST:NP_001350415.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001181919.1 220 Q7L2J0-2 220 100% 0 0
NP_001181920.1 220 Q7L2J0-2 220 100% 0 0
NP_001181921.1 220 Q7L2J0-2 220 100% 0 0
NP_001350415.1 220 Q7L2J0-2 220 100% 0 0

Chromosomal Locations for CCDS 55136.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 100431426 100431689 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100432919 100433137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100433263 100433389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 100433502 100433554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (663 nt):
ATGGTGGGCCTGGATATCGATTCCCGGCTCATCCATTCTGCCCGCCAAAACATCCGACACTACCTTTCCG
AGGAGCTGCGTCTCCCACCCCAGACTTTGGAAGGGGACCCGGGGGCAGAGGGTGAGGAAGGGACCACCAC
CGTTCGAAAGAGGAGCTGCTTCCCAGCCTCGCTGACTGCCAGCCGGGGTCCCATCGCTGCCCCCCAAGTG
CCCTTGGATGGAGCGGACACATCAGTCTTCCCCAACAATGTTGTCTTCGTCACGGGTAATTATGTGCTGG
ATCGAGATGACCTGGTGGAGGCCCAAACACCTGAGTATGATGTGGTGCTCTGCCTCAGCCTCACCAAGTG
GGTGCATCTGAACTGGGGAGACGAGGGCCTGAAGCGCATGTTTCGCCGGATCTACCGGCACCTACGCCCT
GGGGGCATCCTGGTCCTAGAGCCCCAACCCTGGTCGTCGTATGGCAAGAGAAAGACTCTTACAGAAACGA
TCTACAAGAACTACTACCGAATCCAATTGAAGCCAGAGCAGTTCAGTTCCTACCTGACATCCCCAGACGT
GGGCTTCTCCAGCTATGAGCTTGTGGCCACACCCCACAACACCTCTAAAGGCTTCCAGCGTCCTGTGTAC
CTGTTCCACAAGGCCCGATCCCCCAGCCACTAA

Translation (220 aa):
MVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQV
PLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRP
GGILVLEPQPWSSYGKRKTLTETIYKNYYRIQLKPEQFSSYLTSPDVGFSSYELVATPHNTSKGFQRPVY
LFHKARSPSH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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