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Report for CCDS23619.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23619.1 Public Mus musculus 9 Gorasp1 23 108 98 CCDS HistoryNCBI Gene:74498Re-query CCDS DB by CCDS ID:23619.1Re-query CCDS DB by GeneID:74498See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23619.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000035099.8 ENSMUSP00000035099.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000035099.8Link to Ensembl Protein Viewer:ENSMUSP00000035099.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000035099Re-query CCDS DB by Protein ID:ENSMUSP00000035099
Original member Current member NCBI NM_028976.2 NP_083252.1 Accepted alive Link to Nucleotide Sequence:NM_028976.2Link to Protein Sequence:NP_083252.1Re-query CCDS DB by Nucleotide ID:NM_028976Re-query CCDS DB by Protein ID:NP_083252Link to BLAST:NP_083252.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083252.1 446 Q91X51 446 100% 0 0

Chromosomal Locations for CCDS 23619.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 119927774 119928036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119928227 119928379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119928813 119928963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119929551 119929761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119929973 119930103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119930220 119930306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119932621 119932824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119933262 119933342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119937458 119937517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1341 nt):
ATGGGGCTAGGGGCAAGCAGCGAGCAGCCGGCGGGCGGCGAGGGCTTCCATCTGCACGGGGTACAAGAGA
ACTCGCCGGCCCAGCAGGCAGGCCTGGAGCCCTACTTCGACTTCATCATCACCATCGGGCACTCGAGGCT
GAACAAGGAGAACGACACGCTGAAGGCATTGCTGAAGGCCAATGTGGAGAAGCCGGTGAAGCTGGAGGTA
TTCAACATGAAGACCATGAAGGTGCGCGAGGTAGAGGTGGTGCCCAGCAACATGTGGGGCGGCCAGGGCC
TCCTGGGAGCCAGCGTGCGCTTCTGTAGCTTCCGCAGGGCCAGCGAACACGTGTGGCATGTGCTGGATGT
GGAGCCCTCTTCACCTGCTGCCTTGGCCGGCCTGTGCCCTTACACAGACTACATAGTTGGCTCTGACCAG
ATTCTCCAGGAGTCAGAAGACTTCTTTACTCTCATTGAGTCCCATGAGGGGAAGCCTCTGAAGCTGATGG
TGTATAACTCGGAGTCCGACTCCTGCCGGGAGGTGACTGTGACTCCCAATGCAGCCTGGGGTGGAGAGGG
CAGTCTGGGGTGTGGTATTGGTTATGGGTACCTGCATCGGATCCCAACGCAACCCTCCAGCCAGCACAAG
AAGCCACCCGGTGCCACACCACCTGGCACTCCAGCTACGACCTCACAACTTACTGCCTTTCCTCTTGGTG
CCCCACCACCTTGGCCTATCCCTCAGGACTCTTCTGGCCCAGAGTTGGGTTCCAGGCAGAGTGACTTCAT
GGAGGCCCTACCACAAGTCCCTGGTAGCTTTATGGAGGGACAGCTCCTTGGGCCTGGGAGTCCCAGCCAT
GGCGCTGCTGACTGTGGGGGATGCCTGCGTGCTATGGAGATCCCGCTTCAGCCTCCACCTCCAGTGCAGC
GGGTCATGGACCCAGGCTTCCTGGATGTATCAGGCATGTCCCTCCTGGACAGCAGCAACATAAGCGTGTG
CCCCAGCCTGTCATCTTCCACAGTGCTGACCTCCACAGCTGTTTCAGTCTCAGGACCAGAGGACATTGGT
TCTAGCAGCAGTTCTCACGAGCGGGGTGGTGAAGCCACGTGGTCAGGGTCAGAGTTTGAGATCTCCTTCC
CAGACAGTCCAGGTGCCCAGGCCCAGGCGGACCACCTGCCCCGGCTGACTCTCCCCGATGGCCTCACATC
TGCGGCCTCACCTGAAGAAGGGCTGTCTGCAGAGCTGCTGGAAGCACAGACTGAGGAGCCGGCAGACACA
GCCAGCCTGGATTGCAGGGCAGAGACTGAGGGGAGAGCCAGCCAAGCGCAGGCCACCCCAGATCCAGAGC
CTGGGCTGTGA

Translation (446 aa):
MGLGASSEQPAGGEGFHLHGVQENSPAQQAGLEPYFDFIITIGHSRLNKENDTLKALLKANVEKPVKLEV
FNMKTMKVREVEVVPSNMWGGQGLLGASVRFCSFRRASEHVWHVLDVEPSSPAALAGLCPYTDYIVGSDQ
ILQESEDFFTLIESHEGKPLKLMVYNSESDSCREVTVTPNAAWGGEGSLGCGIGYGYLHRIPTQPSSQHK
KPPGATPPGTPATTSQLTAFPLGAPPPWPIPQDSSGPELGSRQSDFMEALPQVPGSFMEGQLLGPGSPSH
GAADCGGCLRAMEIPLQPPPPVQRVMDPGFLDVSGMSLLDSSNISVCPSLSSSTVLTSTAVSVSGPEDIG
SSSSSHERGGEATWSGSEFEISFPDSPGAQAQADHLPRLTLPDGLTSAASPEEGLSAELLEAQTEEPADT
ASLDCRAETEGRASQAQATPDPEPGL


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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